Analysis of interatomic Contacts of Structural Units in PDB entry:
3RRP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RRP entry

There are 2 chains in PDB entry 3RRP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ASP 467
B
 GLN 6VAL 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 3RRP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 36Right-handed alpha
Helix 2
2
A
44 65Right-handed alpha
Helix 3
3
A
69 85Right-handed alpha
Helix 4
4
A
88 92Right-handed 310
Helix 5
5
A
102 119Right-handed alpha
Helix 6
6
A
137 157Right-handed alpha
Helix 7
7
A
157 176Right-handed alpha
Helix 8
8
A
195 221Right-handed alpha
Helix 9
9
A
239 253Right-handed alpha
Helix 10
10
A
264 269Right-handed alpha
Helix 11
11
A
270 298Right-handed alpha
Helix 12
12
A
326 352Right-handed alpha
Helix 13
13
A
360 386Right-handed alpha
Helix 14
14
A
393 404Right-handed alpha
Helix 15
15
A
405 410Right-handed 310
Helix 16
16
A
411 416Right-handed alpha
Helix 17
17
A
416 430Right-handed alpha
Helix 18
18
A
433 441Right-handed alpha
Helix 19
19
A
449 457Right-handed alpha
Helix 20
20
A
458 463Right-handed alpha
Helix 21
21
B
26 36Right-handed alpha
Helix 22
22
B
44 65Right-handed alpha
Helix 23
23
B
69 85Right-handed alpha
Helix 24
24
B
88 92Right-handed 310
Helix 25
25
B
102 120Right-handed alpha
Helix 26
26
B
137 157Right-handed alpha
Helix 27
27
B
157 176Right-handed alpha
Helix 28
28
B
195 221Right-handed alpha
Helix 29
29
B
239 253Right-handed alpha
Helix 30
30
B
264 269Right-handed alpha
Helix 31
31
B
270 298Right-handed alpha
Helix 32
32
B
326 351Right-handed alpha
Helix 33
33
B
360 385Right-handed alpha
Helix 34
34
B
393 404Right-handed alpha
Helix 35
35
B
405 410Right-handed 310
Helix 36
36
B
411 431Right-handed alpha
Helix 37
37
B
433 441Right-handed alpha
Helix 38
38
B
449 458Right-handed alpha
Helix 39
39
B
458 463Right-handed alpha
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There are 8 sheets in PDB entry 3RRP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
15 20anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 185first strand
Strand 2
A
188 194anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
222 223first strand
Strand 2
A
258 259parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
308 309first strand
Strand 2
A
391 392anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 12first strand
Strand 2
B
15 20anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 185first strand
Strand 2
B
188 194anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
222 223first strand
Strand 2
B
258 259parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
308 309first strand
Strand 2
B
391 392anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il