Analysis of interatomic Contacts of Structural Units in PDB entry:
3RSZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3RSZ entry

There are 6 chains in PDB entry 3RSZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	ALA 639
B	SER 2	ALA 639
C	SER 2	ALA 639
D	SER 2	ALA 639
E	UNK 3	UNK 4
F	UNK 1	UNK 5

There are130 helices in PDB entry 3RSZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	23	40	Right-handed alpha
Helix 2	2	A	53	57	Right-handed alpha
Helix 3	3	A	65	69	Right-handed 310
Helix 4	4	A	73	86	Right-handed alpha
Helix 5	5	A	108	113	Right-handed 310
Helix 6	6	A	114	127	Right-handed alpha
Helix 7	7	A	134	158	Right-handed alpha
Helix 8	8	A	170	173	Right-handed 310
Helix 9	9	A	174	182	Right-handed alpha
Helix 10	10	A	195	202	Right-handed alpha
Helix 11	11	A	211	216	Right-handed 310
Helix 12	12	A	217	225	Right-handed alpha
Helix 13	13	A	227	241	Right-handed alpha
Helix 14	14	A	248	259	Right-handed alpha
Helix 15	15	A	272	276	Right-handed 310
Helix 16	16	A	285	301	Right-handed alpha
Helix 17	17	A	308	310	Right-handed 310
Helix 18	18	A	327	345	Right-handed alpha
Helix 19	19	A	365	400	Right-handed alpha
Helix 20	20	A	418	431	Right-handed alpha
Helix 21	21	A	453	462	Right-handed alpha
Helix 22	22	A	491	499	Right-handed alpha
Helix 23	23	A	512	521	Right-handed alpha
Helix 24	24	A	531	538	Right-handed alpha
Helix 25	25	A	546	549	Right-handed 310
Helix 26	26	A	560	578	Right-handed alpha
Helix 27	27	A	579	594	Right-handed alpha
Helix 28	28	A	595	597	Right-handed 310
Helix 29	29	A	598	603	Right-handed alpha
Helix 30	30	A	603	618	Right-handed alpha
Helix 31	31	A	618	627	Right-handed alpha
Helix 32	32	A	634	639	Right-handed alpha
Helix 33	33	B	23	40	Right-handed alpha
Helix 34	34	B	53	57	Right-handed alpha
Helix 35	35	B	65	69	Right-handed 310
Helix 36	36	B	73	86	Right-handed alpha
Helix 37	37	B	108	113	Right-handed 310
Helix 38	38	B	114	127	Right-handed alpha
Helix 39	39	B	134	158	Right-handed alpha
Helix 40	40	B	170	173	Right-handed 310
Helix 41	41	B	174	182	Right-handed alpha
Helix 42	42	B	195	202	Right-handed alpha
Helix 43	43	B	211	216	Right-handed 310
Helix 44	44	B	217	225	Right-handed alpha
Helix 45	45	B	227	241	Right-handed alpha
Helix 46	46	B	248	259	Right-handed alpha
Helix 47	47	B	272	276	Right-handed 310
Helix 48	48	B	285	301	Right-handed alpha
Helix 49	49	B	308	310	Right-handed 310
Helix 50	50	B	327	345	Right-handed alpha
Helix 51	51	B	365	400	Right-handed alpha
Helix 52	52	B	418	431	Right-handed alpha
Helix 53	53	B	453	462	Right-handed alpha
Helix 54	54	B	491	499	Right-handed alpha
Helix 55	55	B	512	521	Right-handed alpha
Helix 56	56	B	531	538	Right-handed alpha
Helix 57	57	B	546	549	Right-handed 310
Helix 58	58	B	560	578	Right-handed alpha
Helix 59	59	B	579	594	Right-handed alpha
Helix 60	60	B	595	597	Right-handed 310
Helix 61	61	B	598	603	Right-handed alpha
Helix 62	62	B	603	618	Right-handed alpha
Helix 63	63	B	618	627	Right-handed alpha
Helix 64	64	B	634	639	Right-handed alpha
Helix 65	65	C	23	31	Right-handed alpha
Helix 66	66	C	31	40	Right-handed alpha
Helix 67	67	C	53	57	Right-handed alpha
Helix 68	68	C	65	69	Right-handed 310
Helix 69	69	C	70	72	Right-handed 310
Helix 70	70	C	73	86	Right-handed alpha
Helix 71	71	C	108	113	Right-handed 310
Helix 72	72	C	114	127	Right-handed alpha
Helix 73	73	C	134	158	Right-handed alpha
Helix 74	74	C	170	173	Right-handed 310
Helix 75	75	C	174	182	Right-handed alpha
Helix 76	76	C	195	202	Right-handed alpha
Helix 77	77	C	217	226	Right-handed alpha
Helix 78	78	C	227	241	Right-handed alpha
Helix 79	79	C	248	259	Right-handed alpha
Helix 80	80	C	272	276	Right-handed 310
Helix 81	81	C	285	301	Right-handed alpha
Helix 82	82	C	308	310	Right-handed 310
Helix 83	83	C	327	345	Right-handed alpha
Helix 84	84	C	365	400	Right-handed alpha
Helix 85	85	C	418	431	Right-handed alpha
Helix 86	86	C	453	462	Right-handed alpha
Helix 87	87	C	491	499	Right-handed alpha
Helix 88	88	C	512	521	Right-handed alpha
Helix 89	89	C	531	539	Right-handed alpha
Helix 90	90	C	540	540	Right-handed 310
Helix 91	91	C	546	549	Right-handed 310
Helix 92	92	C	560	578	Right-handed alpha
Helix 93	93	C	579	594	Right-handed alpha
Helix 94	94	C	595	597	Right-handed 310
Helix 95	95	C	598	618	Right-handed alpha
Helix 96	96	C	618	627	Right-handed alpha
Helix 97	97	C	634	639	Right-handed alpha
Helix 98	98	D	23	31	Right-handed alpha
Helix 99	99	D	31	40	Right-handed alpha
Helix 100	100	D	53	57	Right-handed alpha
Helix 101	101	D	65	69	Right-handed 310
Helix 102	102	D	73	86	Right-handed alpha
Helix 103	103	D	108	113	Right-handed 310
Helix 104	104	D	114	127	Right-handed alpha
Helix 105	105	D	134	158	Right-handed alpha
Helix 106	106	D	170	173	Right-handed 310
Helix 107	107	D	174	182	Right-handed alpha
Helix 108	108	D	195	202	Right-handed alpha
Helix 109	109	D	217	226	Right-handed alpha
Helix 110	110	D	227	241	Right-handed alpha
Helix 111	111	D	248	259	Right-handed alpha
Helix 112	112	D	272	276	Right-handed 310
Helix 113	113	D	285	301	Right-handed alpha
Helix 114	114	D	308	310	Right-handed 310
Helix 115	115	D	327	345	Right-handed alpha
Helix 116	116	D	365	400	Right-handed alpha
Helix 117	117	D	418	431	Right-handed alpha
Helix 118	118	D	453	462	Right-handed alpha
Helix 119	119	D	491	499	Right-handed alpha
Helix 120	120	D	512	521	Right-handed alpha
Helix 121	121	D	531	539	Right-handed alpha
Helix 122	122	D	540	540	Right-handed 310
Helix 123	123	D	546	549	Right-handed 310
Helix 124	124	D	560	578	Right-handed alpha
Helix 125	125	D	579	594	Right-handed alpha
Helix 126	126	D	595	597	Right-handed 310
Helix 127	127	D	598	618	Right-handed alpha
Helix 128	128	D	618	627	Right-handed alpha
Helix 129	129	D	634	639	Right-handed alpha
Helix 130	130	F	1	5	Right-handed 310

There are 12 sheets in PDB entry 3RSZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	90	95	anti-parallel
Strand 3	A	102	106	anti-parallel
Strand 4	A	43	48	parallel
Strand 5	A	4	13	parallel
Strand 6	A	161	168	parallel
Strand 7	A	186	192	parallel
Strand 8	A	243	246	parallel
Strand 9	A	265	266	parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	472	476	first strand
Strand 2	A	350	356	parallel
Strand 3	A	312	318	parallel
Strand 4	A	501	503	parallel
Strand 5	A	525	528	parallel
Strand 6	A	551	554	parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	364	first strand
Strand 2	A	445	447	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	60	first strand
Strand 2	B	90	95	anti-parallel
Strand 3	B	102	106	anti-parallel
Strand 4	B	43	48	parallel
Strand 5	B	4	13	parallel
Strand 6	B	161	168	parallel
Strand 7	B	186	192	parallel
Strand 8	B	243	246	parallel
Strand 9	B	265	266	parallel

Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	472	476	first strand
Strand 2	B	350	356	parallel
Strand 3	B	312	318	parallel
Strand 4	B	501	503	parallel
Strand 5	B	525	528	parallel
Strand 6	B	551	554	parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	364	first strand
Strand 2	B	445	447	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	60	first strand
Strand 2	C	90	95	anti-parallel
Strand 3	C	102	106	anti-parallel
Strand 4	C	43	48	parallel
Strand 5	C	4	13	parallel
Strand 6	C	161	168	parallel
Strand 7	C	187	192	parallel
Strand 8	C	243	246	parallel

Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	472	476	first strand
Strand 2	C	350	356	parallel
Strand 3	C	312	318	parallel
Strand 4	C	501	503	parallel
Strand 5	C	525	528	parallel
Strand 6	C	551	554	parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	364	first strand
Strand 2	C	445	447	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	60	first strand
Strand 2	D	90	95	anti-parallel
Strand 3	D	102	106	anti-parallel
Strand 4	D	43	48	parallel
Strand 5	D	4	13	parallel
Strand 6	D	161	168	parallel
Strand 7	D	187	192	parallel
Strand 8	D	243	246	parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	472	476	first strand
Strand 2	D	350	356	parallel
Strand 3	D	312	318	parallel
Strand 4	D	501	503	parallel
Strand 5	D	525	528	parallel
Strand 6	D	551	554	parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	361	364	first strand
Strand 2	D	445	447	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3RSZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
3RSZ