Analysis of interatomic Contacts of Structural Units in PDB entry:
3RV2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RV2 entry

There are 2 chains in PDB entry 3RV2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ILE 403
B
 GLY 5ILE 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3RV2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 37Right-handed alpha
Helix 2
2
A
63 69Right-handed alpha
Helix 3
3
A
69 82Right-handed alpha
Helix 4
4
A
86 89Right-handed 310
Helix 5
5
A
151 170Right-handed alpha
Helix 6
6
A
214 223Right-handed alpha
Helix 7
7
A
223 232Right-handed alpha
Helix 8
8
A
290 309Right-handed alpha
Helix 9
9
A
342 354Right-handed alpha
Helix 10
10
A
357 365Right-handed alpha
Helix 11
11
A
372 377Right-handed 310
Helix 12
12
A
388 392Right-handed 310
Helix 13
13
A
395 403Right-handed alpha
Helix 14
14
B
17 37Right-handed alpha
Helix 15
15
B
63 69Right-handed alpha
Helix 16
16
B
69 82Right-handed alpha
Helix 17
17
B
86 89Right-handed 310
Helix 18
18
B
151 170Right-handed alpha
Helix 19
19
B
214 223Right-handed alpha
Helix 20
20
B
223 232Right-handed alpha
Helix 21
21
B
290 309Right-handed alpha
Helix 22
22
B
342 354Right-handed alpha
Helix 23
23
B
357 365Right-handed alpha
Helix 24
24
B
372 377Right-handed 310
Helix 25
25
B
388 392Right-handed 310
Helix 26
26
B
395 403Right-handed alpha
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There are 8 sheets in PDB entry 3RV2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 13first strand
Strand 2
A
176 189anti-parallel
Strand 3
A
192 205anti-parallel
Strand 4
A
242 245parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 104first strand
Strand 2
A
52 60parallel
Strand 3
A
41 49anti-parallel
Strand 4
A
260 262anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
90 91anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 143first strand
Strand 2
A
314 321anti-parallel
Strand 3
A
330 334anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 13first strand
Strand 2
B
176 189anti-parallel
Strand 3
B
192 205anti-parallel
Strand 4
B
242 245parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 104first strand
Strand 2
B
52 60parallel
Strand 3
B
41 49anti-parallel
Strand 4
B
260 262anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 85first strand
Strand 2
B
90 91anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 143first strand
Strand 2
B
314 321anti-parallel
Strand 3
B
330 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il