Analysis of interatomic Contacts of Structural Units in PDB entry:
3RV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RV6 entry

There are 2 chains in PDB entry 3RV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 15GLN 450
B
 SER 15GLN 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3RV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 38Right-handed alpha
Helix 2
2
A
87 100Right-handed alpha
Helix 3
3
A
112 120Right-handed 310
Helix 4
4
A
121 125Right-handed 310
Helix 5
5
A
154 168Right-handed alpha
Helix 6
6
A
186 200Right-handed alpha
Helix 7
7
A
219 229Right-handed alpha
Helix 8
8
A
286 310Right-handed alpha
Helix 9
9
A
311 313Right-handed 310
Helix 10
10
A
348 357Right-handed alpha
Helix 11
11
A
359 362Right-handed 310
Helix 12
12
A
366 378Right-handed alpha
Helix 13
13
A
427 440Right-handed alpha
Helix 14
14
A
441 446Right-handed 310
Helix 15
15
B
25 42Right-handed alpha
Helix 16
16
B
87 100Right-handed alpha
Helix 17
17
B
112 120Right-handed 310
Helix 18
18
B
121 125Right-handed 310
Helix 19
19
B
154 168Right-handed alpha
Helix 20
20
B
186 200Right-handed alpha
Helix 21
21
B
219 229Right-handed alpha
Helix 22
22
B
291 313Right-handed alpha
Helix 23
23
B
348 357Right-handed alpha
Helix 24
24
B
359 362Right-handed 310
Helix 25
25
B
366 378Right-handed alpha
Helix 26
26
B
427 440Right-handed alpha
Helix 27
27
B
441 446Right-handed 310
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There are 4 sheets in PDB entry 3RV6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
147 151anti-parallel
Strand 3
A
130 143anti-parallel
Strand 4
A
53 67anti-parallel
Strand 5
A
105 110first strand
Strand 6
A
388 393anti-parallel
Strand 7
A
398 402anti-parallel
Strand 8
A
253 257anti-parallel
Strand 9
A
262 266anti-parallel
Strand 10
A
336 342anti-parallel
Strand 11
A
319 325anti-parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
53 67anti-parallel
Strand 4
A
130 143anti-parallel
Strand 5
A
45 50first strand
Strand 6
A
235 241anti-parallel
Strand 7
A
244 250anti-parallel
Strand 8
A
406 410anti-parallel
Strand 9
A
413 422anti-parallel
Strand 10
A
205 214anti-parallel
Strand 11
A
364 365anti-parallel
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There are 11 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
147 151anti-parallel
Strand 3
B
130 143anti-parallel
Strand 4
B
53 67anti-parallel
Strand 5
B
105 110first strand
Strand 6
B
388 393anti-parallel
Strand 7
B
398 402anti-parallel
Strand 8
B
253 257anti-parallel
Strand 9
B
262 267anti-parallel
Strand 10
B
334 342anti-parallel
Strand 11
B
319 327anti-parallel
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There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
78 82first strand
Strand 2
B
71 75anti-parallel
Strand 3
B
53 67anti-parallel
Strand 4
B
130 143anti-parallel
Strand 5
B
45 50first strand
Strand 6
B
235 241anti-parallel
Strand 7
B
244 250anti-parallel
Strand 8
B
405 410anti-parallel
Strand 9
B
413 422anti-parallel
Strand 10
B
205 214anti-parallel
Strand 11
B
364 365anti-parallel
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