Analysis of interatomic Contacts of Structural Units in PDB entry:
3RWL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RWL entry

There is 1 chain in PDB entry 3RWL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6ALA 416
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3RWL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
21 27Right-handed alpha
Helix 3
3
A
29 41Right-handed alpha
Helix 4
4
A
59 69Right-handed alpha
Helix 5
5
A
76 80Right-handed 310
Helix 6
6
A
100 104Right-handed 310
Helix 7
7
A
107 117Right-handed alpha
Helix 8
8
A
118 120Right-handed 310
Helix 9
9
A
121 142Right-handed alpha
Helix 10
10
A
151 155Right-handed alpha
Helix 11
11
A
155 169Right-handed alpha
Helix 12
12
A
171 174Right-handed 310
Helix 13
13
A
175 186Right-handed alpha
Helix 14
14
A
196 220Right-handed alpha
Helix 15
15
A
226 234Right-handed alpha
Helix 16
16
A
235 240Right-handed 310
Helix 17
17
A
241 274Right-handed alpha
Helix 18
18
A
274 284Right-handed alpha
Helix 19
19
A
287 300Right-handed alpha
Helix 20
20
A
329 334Right-handed alpha
Helix 21
21
A
368 385Right-handed alpha
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There are 4 sheets in PDB entry 3RWL. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 46first strand
Strand 2
A
54 57anti-parallel
Strand 3
A
325 328parallel
Strand 4
A
305 309anti-parallel
Strand 5
A
73 74anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
411 415anti-parallel
Strand 3
A
389 392anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 315first strand
Strand 2
A
318 320anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 398first strand
Strand 2
A
407 409anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il