Analysis of interatomic Contacts of Structural Units in PDB entry:
3RXZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RXZ entry

There are 4 chains in PDB entry 3RXZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LEU 8THR 293
B
GLU 7LEU 292
C
GLU 7THR 293
D
GLU 7THR 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3RXZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
33 40Right-handed alpha
Helix 2
2
A
41 45Right-handed 310
Helix 3
3
A
46 59Right-handed alpha
Helix 4
4
A
59 71Right-handed alpha
Helix 5
5
A
80 87Right-handed alpha
Helix 6
6
A
87 97Right-handed alpha
Helix 7
7
A
115 135Right-handed alpha
Helix 8
8
A
143 147Right-handed 310
Helix 9
9
A
151 159Right-handed alpha
Helix 10
10
A
189 193Right-handed 310
Helix 11
11
A
194 199Right-handed alpha
Helix 12
12
A
212 231Right-handed alpha
Helix 13
13
A
239 244Right-handed alpha
Helix 14
14
A
245 261Right-handed alpha
Helix 15
15
A
269 280Right-handed alpha
Helix 16
16
B
16 20Right-handed 310
Helix 17
17
B
33 40Right-handed alpha
Helix 18
18
B
41 45Right-handed 310
Helix 19
19
B
46 59Right-handed alpha
Helix 20
20
B
59 71Right-handed alpha
Helix 21
21
B
80 87Right-handed alpha
Helix 22
22
B
87 97Right-handed alpha
Helix 23
23
B
115 135Right-handed alpha
Helix 24
24
B
143 147Right-handed 310
Helix 25
25
B
151 159Right-handed alpha
Helix 26
26
B
189 193Right-handed 310
Helix 27
27
B
194 199Right-handed alpha
Helix 28
28
B
212 231Right-handed alpha
Helix 29
29
B
239 244Right-handed alpha
Helix 30
30
B
245 261Right-handed alpha
Helix 31
31
B
269 280Right-handed alpha
Helix 32
32
C
33 40Right-handed alpha
Helix 33
33
C
41 45Right-handed 310
Helix 34
34
C
46 59Right-handed alpha
Helix 35
35
C
59 72Right-handed alpha
Helix 36
36
C
80 87Right-handed alpha
Helix 37
37
C
87 97Right-handed alpha
Helix 38
38
C
115 135Right-handed alpha
Helix 39
39
C
143 147Right-handed 310
Helix 40
40
C
151 159Right-handed alpha
Helix 41
41
C
189 193Right-handed 310
Helix 42
42
C
194 199Right-handed alpha
Helix 43
43
C
212 231Right-handed alpha
Helix 44
44
C
239 244Right-handed alpha
Helix 45
45
C
245 261Right-handed alpha
Helix 46
46
C
269 279Right-handed alpha
Helix 47
47
D
33 40Right-handed alpha
Helix 48
48
D
41 45Right-handed 310
Helix 49
49
D
46 59Right-handed alpha
Helix 50
50
D
59 72Right-handed alpha
Helix 51
51
D
80 87Right-handed alpha
Helix 52
52
D
87 97Right-handed alpha
Helix 53
53
D
115 135Right-handed alpha
Helix 54
54
D
143 147Right-handed 310
Helix 55
55
D
151 159Right-handed alpha
Helix 56
56
D
189 193Right-handed 310
Helix 57
57
D
194 199Right-handed alpha
Helix 58
58
D
212 231Right-handed alpha
Helix 59
59
D
239 244Right-handed alpha
Helix 60
60
D
245 261Right-handed alpha
Helix 61
61
D
269 279Right-handed alpha
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There are 12 sheets in PDB entry 3RXZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
100 103first strand
Strand 2
A
75 79parallel
Strand 3
A
22 29parallel
Strand 4
A
233 238parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
100 103first strand
Strand 2
A
75 79parallel
Strand 3
A
22 29parallel
Strand 4
A
265 267parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
140 141first strand
Strand 2
A
163 164parallel
Strand 3
A
184 185parallel
Strand 4
A
174 175anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 103first strand
Strand 2
B
75 79parallel
Strand 3
B
22 29parallel
Strand 4
B
233 238parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
100 103first strand
Strand 2
B
75 79parallel
Strand 3
B
22 29parallel
Strand 4
B
265 267parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
140 141first strand
Strand 2
B
163 164parallel
Strand 3
B
183 185parallel
Strand 4
B
174 176anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
100 103first strand
Strand 2
C
75 79parallel
Strand 3
C
22 29parallel
Strand 4
C
233 238parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
100 103first strand
Strand 2
C
75 79parallel
Strand 3
C
22 29parallel
Strand 4
C
265 267parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
140 141first strand
Strand 2
C
163 164parallel
Strand 3
C
181 185parallel
Strand 4
C
174 178anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
100 103first strand
Strand 2
D
75 79parallel
Strand 3
D
22 29parallel
Strand 4
D
233 238parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
100 103first strand
Strand 2
D
75 79parallel
Strand 3
D
22 29parallel
Strand 4
D
265 267parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
140 141first strand
Strand 2
D
163 164parallel
Strand 3
D
184 185parallel
Strand 4
D
174 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il