Analysis of interatomic Contacts of Structural Units in PDB entry:
3RY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RY7 entry

There is 1 chain in PDB entry 3RY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2VAL 304
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3RY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 53Right-handed alpha
Helix 2
2
A
69 79Right-handed alpha
Helix 3
3
A
113 119Right-handed 310
Helix 4
4
A
120 126Right-handed alpha
Helix 5
5
A
127 133Right-handed alpha
Helix 6
6
A
144 158Right-handed alpha
Helix 7
7
A
173 178Right-handed alpha
Helix 8
8
A
186 195Right-handed alpha
Helix 9
9
A
200 214Right-handed alpha
Helix 10
10
A
224 226Right-handed 310
Helix 11
11
A
251 264Right-handed alpha
Helix 12
12
A
270 284Right-handed alpha
Helix 13
13
A
291 295Right-handed 310
Helix 14
14
A
297 303Right-handed alpha
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There are 3 sheets in PDB entry 3RY7. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 60first strand
Strand 2
A
4 8parallel
Strand 3
A
136 140parallel
Strand 4
A
161 165parallel
Strand 5
A
182 183parallel
Strand 6
A
218 222parallel
Strand 7
A
228 231anti-parallel
Strand 8
A
236 239anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 40first strand
Strand 2
A
12 18anti-parallel
Strand 3
A
95 101parallel
Strand 4
A
107 112anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
87 89parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il