Analysis of interatomic Contacts of Structural Units in PDB entry:
3RYL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RYL entry

There are 2 chains in PDB entry 3RYL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 244ALA 481
B
 MSE 246SER 480
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 3RYL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
251 257Right-handed alpha
Helix 2
2
A
261 279Right-handed alpha
Helix 3
3
A
283 293Right-handed alpha
Helix 4
4
A
296 301Right-handed alpha
Helix 5
5
A
305 313Right-handed alpha
Helix 6
6
A
314 317Right-handed 310
Helix 7
7
A
340 350Right-handed alpha
Helix 8
8
A
374 385Right-handed alpha
Helix 9
9
A
386 395Right-handed alpha
Helix 10
10
A
397 408Right-handed alpha
Helix 11
11
A
414 433Right-handed alpha
Helix 12
12
A
437 439Right-handed 310
Helix 13
13
A
440 455Right-handed alpha
Helix 14
14
A
461 475Right-handed alpha
Helix 15
15
B
251 257Right-handed alpha
Helix 16
16
B
261 279Right-handed alpha
Helix 17
17
B
305 316Right-handed alpha
Helix 18
18
B
341 347Right-handed alpha
Helix 19
19
B
374 384Right-handed alpha
Helix 20
20
B
386 395Right-handed alpha
Helix 21
21
B
397 407Right-handed alpha
Helix 22
22
B
408 413Right-handed 310
Helix 23
23
B
414 434Right-handed alpha
Helix 24
24
B
437 439Right-handed 310
Helix 25
25
B
440 455Right-handed alpha
Helix 26
26
B
461 480Right-handed alpha
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There are no sheets in PDB entry 3RYL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il