Analysis of interatomic Contacts of Structural Units in PDB entry:
3RZF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RZF entry

There is 1 chain in PDB entry 3RZF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 16ARG 637
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3RZF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 68Right-handed alpha
Helix 2
2
A
103 109Right-handed alpha
Helix 3
3
A
110 114Right-handed 310
Helix 4
4
A
120 139Right-handed alpha
Helix 5
5
A
190 195Right-handed alpha
Helix 6
6
A
201 218Right-handed alpha
Helix 7
7
A
268 280Right-handed alpha
Helix 8
8
A
300 309Right-handed alpha
Helix 9
9
A
332 342Right-handed alpha
Helix 10
10
A
347 351Right-handed 310
Helix 11
11
A
366 370Right-handed 310
Helix 12
12
A
409 416Right-handed 310
Helix 13
13
A
428 452Right-handed alpha
Helix 14
14
A
455 465Right-handed alpha
Helix 15
15
A
466 470Right-handed 310
Helix 16
16
A
541 546Right-handed alpha
Helix 17
17
A
560 571Right-handed alpha
Helix 18
18
A
589 599Right-handed alpha
Helix 19
19
A
605 613Right-handed alpha
Helix 20
20
A
614 616Right-handed 310
Helix 21
21
A
626 631Right-handed alpha
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There are 4 sheets in PDB entry 3RZF. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
27 33anti-parallel
Strand 3
A
40 46anti-parallel
Strand 4
A
94 97anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
151 154first strand
Strand 2
A
161 164anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 312first strand
Strand 2
A
325 326anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 322first strand
Strand 2
A
314 316anti-parallel
Strand 3
A
386 389parallel
Strand 4
A
352 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il