Analysis of interatomic Contacts of Structural Units in PDB entry:
3RZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3RZV entry

There is 1 chain in PDB entry 3RZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 246ARG 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3RZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
262 277Right-handed alpha
Helix 2
2
A
315 327Right-handed alpha
Helix 3
3
A
345 359Right-handed alpha
Helix 4
4
A
380 390Right-handed alpha
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There are 3 sheets in PDB entry 3RZV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 407first strand
Strand 2
A
373 379anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
329 336parallel
Strand 5
A
282 290anti-parallel
Strand 6
A
293 301anti-parallel
Strand 7
A
257 260parallel
Strand 8
A
411 414parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 407first strand
Strand 2
A
373 379anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
329 336parallel
Strand 5
A
282 290anti-parallel
Strand 6
A
293 301anti-parallel
Strand 7
A
419 422parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 306first strand
Strand 2
A
311 313anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il