Analysis of interatomic Contacts of Structural Units in PDB entry:
3S24

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3S24 entry

There are 7 chains in PDB entry 3S24 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 229	ARG 564
B	GLY 229	ARG 564
C	GLY 229	ARG 564
D	GLY 229	ARG 564
E	GLY 229	ALA 567
G	GLY 229	THR 566
F	GLY 229	CYS 565

There are 70 helices in PDB entry 3S24. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	246	262	Right-handed alpha
Helix 2	2	A	280	286	Right-handed 310
Helix 3	3	A	371	375	Right-handed 310
Helix 4	4	A	376	388	Right-handed alpha
Helix 5	5	A	388	395	Right-handed alpha
Helix 6	6	A	418	425	Right-handed alpha
Helix 7	7	A	461	464	Right-handed 310
Helix 8	8	A	506	510	Right-handed 310
Helix 9	9	A	538	551	Right-handed alpha
Helix 10	10	A	554	564	Right-handed alpha
Helix 11	11	B	247	262	Right-handed alpha
Helix 12	12	B	277	282	Right-handed alpha
Helix 13	13	B	283	286	Right-handed 310
Helix 14	14	B	371	375	Right-handed 310
Helix 15	15	B	376	388	Right-handed alpha
Helix 16	16	B	388	398	Right-handed alpha
Helix 17	17	B	418	422	Right-handed alpha
Helix 18	18	B	423	425	Right-handed 310
Helix 19	19	B	538	550	Right-handed alpha
Helix 20	20	B	554	563	Right-handed alpha
Helix 21	21	C	246	262	Right-handed alpha
Helix 22	22	C	279	286	Right-handed 310
Helix 23	23	C	371	375	Right-handed 310
Helix 24	24	C	376	388	Right-handed alpha
Helix 25	25	C	388	398	Right-handed alpha
Helix 26	26	C	420	425	Right-handed alpha
Helix 27	27	C	461	464	Right-handed 310
Helix 28	28	C	538	550	Right-handed alpha
Helix 29	29	C	554	564	Right-handed alpha
Helix 30	30	D	249	262	Right-handed alpha
Helix 31	31	D	279	286	Right-handed 310
Helix 32	32	D	371	375	Right-handed 310
Helix 33	33	D	376	388	Right-handed alpha
Helix 34	34	D	388	398	Right-handed alpha
Helix 35	35	D	402	406	Right-handed 310
Helix 36	36	D	420	426	Right-handed alpha
Helix 37	37	D	506	511	Right-handed alpha
Helix 38	38	D	538	550	Right-handed alpha
Helix 39	39	D	554	563	Right-handed alpha
Helix 40	40	E	246	262	Right-handed alpha
Helix 41	41	E	279	286	Right-handed 310
Helix 42	42	E	371	375	Right-handed 310
Helix 43	43	E	376	389	Right-handed alpha
Helix 44	44	E	389	398	Right-handed alpha
Helix 45	45	E	402	406	Right-handed 310
Helix 46	46	E	419	421	Right-handed 310
Helix 47	47	E	461	464	Right-handed 310
Helix 48	48	E	507	511	Right-handed 310
Helix 49	49	E	538	551	Right-handed alpha
Helix 50	50	E	554	566	Right-handed alpha
Helix 51	51	G	247	262	Right-handed alpha
Helix 52	52	G	279	286	Right-handed 310
Helix 53	53	G	371	375	Right-handed 310
Helix 54	54	G	376	388	Right-handed alpha
Helix 55	55	G	388	398	Right-handed alpha
Helix 56	56	G	461	464	Right-handed 310
Helix 57	57	G	538	551	Right-handed alpha
Helix 58	58	G	554	563	Right-handed alpha
Helix 59	59	F	246	262	Right-handed alpha
Helix 60	60	F	279	281	Right-handed 310
Helix 61	61	F	282	287	Right-handed alpha
Helix 62	62	F	371	375	Right-handed 310
Helix 63	63	F	376	388	Right-handed alpha
Helix 64	64	F	388	398	Right-handed alpha
Helix 65	65	F	402	406	Right-handed 310
Helix 66	66	F	418	424	Right-handed alpha
Helix 67	67	F	461	464	Right-handed 310
Helix 68	68	F	504	511	Right-handed 310
Helix 69	69	F	538	551	Right-handed alpha
Helix 70	70	F	554	564	Right-handed alpha

There are 22 sheets in PDB entry 3S24. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	243	first strand
Strand 2	A	319	322	anti-parallel
Strand 3	A	310	314	anti-parallel
Strand 4	A	298	304	anti-parallel
Strand 5	A	340	351	anti-parallel
Strand 6	A	354	366	anti-parallel
Strand 7	A	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	271	275	first strand
Strand 2	A	451	459	parallel
Strand 3	A	437	444	anti-parallel
Strand 4	A	289	295	anti-parallel
Strand 5	A	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	499	501	first strand
Strand 2	A	484	490	anti-parallel
Strand 3	A	466	476	anti-parallel
Strand 4	A	514	520	anti-parallel
Strand 5	A	523	529	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	243	first strand
Strand 2	B	319	321	anti-parallel
Strand 3	B	310	314	anti-parallel
Strand 4	B	298	304	anti-parallel
Strand 5	B	340	350	anti-parallel
Strand 6	B	355	366	anti-parallel
Strand 7	B	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	271	275	first strand
Strand 2	B	451	459	parallel
Strand 3	B	440	444	anti-parallel
Strand 4	B	289	292	anti-parallel
Strand 5	B	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	467	470	first strand
Strand 2	B	514	520	anti-parallel
Strand 3	B	523	529	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	491	first strand
Strand 2	B	494	501	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	243	first strand
Strand 2	C	319	321	anti-parallel
Strand 3	C	310	313	anti-parallel
Strand 4	C	298	304	anti-parallel
Strand 5	C	340	351	anti-parallel
Strand 6	C	354	366	anti-parallel
Strand 7	C	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	271	275	first strand
Strand 2	C	451	459	parallel
Strand 3	C	439	444	anti-parallel
Strand 4	C	289	294	anti-parallel
Strand 5	C	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	494	500	first strand
Strand 2	C	488	491	anti-parallel
Strand 3	C	466	472	anti-parallel
Strand 4	C	514	520	anti-parallel
Strand 5	C	523	529	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	243	first strand
Strand 2	D	319	321	anti-parallel
Strand 3	D	310	314	anti-parallel
Strand 4	D	298	304	anti-parallel
Strand 5	D	340	348	anti-parallel
Strand 6	D	357	366	anti-parallel
Strand 7	D	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	271	275	first strand
Strand 2	D	451	459	parallel
Strand 3	D	440	444	anti-parallel
Strand 4	D	289	292	anti-parallel
Strand 5	D	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	499	502	first strand
Strand 2	D	484	490	anti-parallel
Strand 3	D	466	476	anti-parallel
Strand 4	D	514	519	anti-parallel
Strand 5	D	524	530	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	242	243	first strand
Strand 2	E	319	321	anti-parallel
Strand 3	E	311	313	anti-parallel
Strand 4	E	298	304	anti-parallel
Strand 5	E	340	350	anti-parallel
Strand 6	E	355	366	anti-parallel
Strand 7	E	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	271	275	first strand
Strand 2	E	451	459	parallel
Strand 3	E	439	444	anti-parallel
Strand 4	E	289	294	anti-parallel
Strand 5	E	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	499	501	first strand
Strand 2	E	486	490	anti-parallel
Strand 3	E	466	474	anti-parallel
Strand 4	E	514	519	anti-parallel
Strand 5	E	524	529	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	242	243	first strand
Strand 2	G	319	321	anti-parallel
Strand 3	G	310	314	anti-parallel
Strand 4	G	298	304	anti-parallel
Strand 5	G	340	349	anti-parallel
Strand 6	G	356	366	anti-parallel
Strand 7	G	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	271	275	first strand
Strand 2	G	451	459	parallel
Strand 3	G	439	444	anti-parallel
Strand 4	G	289	294	anti-parallel
Strand 5	G	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	499	501	first strand
Strand 2	G	487	490	anti-parallel
Strand 3	G	466	473	anti-parallel
Strand 4	G	514	520	anti-parallel
Strand 5	G	523	529	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	242	243	first strand
Strand 2	F	319	321	anti-parallel
Strand 3	F	310	314	anti-parallel
Strand 4	F	298	304	anti-parallel
Strand 5	F	340	351	anti-parallel
Strand 6	F	354	366	anti-parallel
Strand 7	F	409	412	parallel

Back to list of sheets
Back to top of page

There are 5 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	272	275	first strand
Strand 2	F	452	459	parallel
Strand 3	F	440	444	anti-parallel
Strand 4	F	289	292	anti-parallel
Strand 5	F	416	417	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	499	502	first strand
Strand 2	F	486	490	anti-parallel
Strand 3	F	466	473	anti-parallel
Strand 4	F	514	519	anti-parallel
Strand 5	F	524	529	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3S24

Analysis of interatomic Contacts of Structural Units in PDB entry:
3S24