Analysis of interatomic Contacts of Structural Units in PDB entry:
3S2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3S2W entry

There are 8 chains in PDB entry 3S2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8MSE 156
B
 LEU 15MSE 156
C
 CYS 16MSE 156
D
 CYS 16MSE 156
E
 ASP 17MSE 156
F
 LEU 15MSE 156
G
 ASP 17MSE 156
H
 LYS 18MSE 156
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 3S2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 13Right-handed alpha
Helix 2
2
A
19 41Right-handed alpha
Helix 3
3
A
42 44Right-handed 310
Helix 4
4
A
49 59Right-handed alpha
Helix 5
5
A
64 72Right-handed alpha
Helix 6
6
A
74 88Right-handed alpha
Helix 7
7
A
108 131Right-handed alpha
Helix 8
8
A
134 155Right-handed alpha
Helix 9
9
B
16 40Right-handed alpha
Helix 10
10
B
41 44Right-handed 310
Helix 11
11
B
49 59Right-handed alpha
Helix 12
12
B
64 72Right-handed alpha
Helix 13
13
B
74 88Right-handed alpha
Helix 14
14
B
108 114Right-handed alpha
Helix 15
15
B
114 131Right-handed alpha
Helix 16
16
B
134 155Right-handed alpha
Helix 17
17
C
16 41Right-handed alpha
Helix 18
18
C
42 44Right-handed 310
Helix 19
19
C
49 59Right-handed alpha
Helix 20
20
C
64 72Right-handed alpha
Helix 21
21
C
74 88Right-handed alpha
Helix 22
22
C
108 114Right-handed alpha
Helix 23
23
C
114 131Right-handed alpha
Helix 24
24
C
134 155Right-handed alpha
Helix 25
25
D
16 41Right-handed alpha
Helix 26
26
D
42 44Right-handed 310
Helix 27
27
D
49 59Right-handed alpha
Helix 28
28
D
64 72Right-handed alpha
Helix 29
29
D
74 88Right-handed alpha
Helix 30
30
D
108 113Right-handed alpha
Helix 31
31
D
114 130Right-handed alpha
Helix 32
32
D
134 153Right-handed alpha
Helix 33
33
E
17 41Right-handed alpha
Helix 34
34
E
42 44Right-handed 310
Helix 35
35
E
49 59Right-handed alpha
Helix 36
36
E
64 72Right-handed alpha
Helix 37
37
E
74 88Right-handed alpha
Helix 38
38
E
108 113Right-handed alpha
Helix 39
39
E
114 131Right-handed alpha
Helix 40
40
E
134 156Right-handed alpha
Helix 41
41
F
15 41Right-handed alpha
Helix 42
42
F
42 44Right-handed 310
Helix 43
43
F
46 48Right-handed 310
Helix 44
44
F
49 59Right-handed alpha
Helix 45
45
F
64 72Right-handed alpha
Helix 46
46
F
74 88Right-handed alpha
Helix 47
47
F
108 114Right-handed alpha
Helix 48
48
F
114 131Right-handed alpha
Helix 49
49
F
134 156Right-handed alpha
Helix 50
50
G
19 41Right-handed alpha
Helix 51
51
G
42 44Right-handed 310
Helix 52
52
G
49 59Right-handed alpha
Helix 53
53
G
64 71Right-handed alpha
Helix 54
54
G
74 88Right-handed alpha
Helix 55
55
G
108 113Right-handed alpha
Helix 56
56
G
114 130Right-handed alpha
Helix 57
57
G
134 155Right-handed alpha
Helix 58
58
H
20 40Right-handed alpha
Helix 59
59
H
49 59Right-handed alpha
Helix 60
60
H
64 72Right-handed alpha
Helix 61
61
H
74 88Right-handed alpha
Helix 62
62
H
108 114Right-handed alpha
Helix 63
63
H
114 130Right-handed alpha
Helix 64
64
H
134 154Right-handed alpha
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There are 8 sheets in PDB entry 3S2W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
103 107anti-parallel
Strand 3
A
91 95anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 63first strand
Strand 2
B
104 107anti-parallel
Strand 3
B
91 94anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 63first strand
Strand 2
C
103 107anti-parallel
Strand 3
C
91 95anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 63first strand
Strand 2
D
103 107anti-parallel
Strand 3
D
91 95anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
62 63first strand
Strand 2
E
104 107anti-parallel
Strand 3
E
91 94anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
62 63first strand
Strand 2
F
104 107anti-parallel
Strand 3
F
91 94anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
62 63first strand
Strand 2
G
104 107anti-parallel
Strand 3
G
91 94anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
62 63first strand
Strand 2
H
103 107anti-parallel
Strand 3
H
91 95anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il