Analysis of interatomic Contacts of Structural Units in PDB entry:
3S4Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3S4Z entry

There are 2 chains in PDB entry 3S4Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 1280
B
 MET 1LYS 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are195 helices in PDB entry 3S4Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 12Right-handed alpha
Helix 2
2
A
14 25Right-handed alpha
Helix 3
3
A
28 39Right-handed alpha
Helix 4
4
A
39 45Right-handed alpha
Helix 5
5
A
45 52Right-handed alpha
Helix 6
6
A
58 79Right-handed alpha
Helix 7
7
A
82 97Right-handed alpha
Helix 8
8
A
98 100Right-handed 310
Helix 9
9
A
101 118Right-handed alpha
Helix 10
10
A
128 139Right-handed alpha
Helix 11
11
A
152 167Right-handed alpha
Helix 12
12
A
173 181Right-handed alpha
Helix 13
13
A
182 184Right-handed 310
Helix 14
14
A
187 203Right-handed alpha
Helix 15
15
A
204 205Right-handed 310
Helix 16
16
A
206 208Right-handed 310
Helix 17
17
A
209 222Right-handed alpha
Helix 18
18
A
225 249Right-handed alpha
Helix 19
19
A
260 282Right-handed alpha
Helix 20
20
A
282 294Right-handed alpha
Helix 21
21
A
298 305Right-handed alpha
Helix 22
22
A
306 317Right-handed alpha
Helix 23
23
A
318 321Right-handed 310
Helix 24
24
A
322 345Right-handed alpha
Helix 25
25
A
347 354Right-handed alpha
Helix 26
26
A
359 371Right-handed alpha
Helix 27
27
A
378 394Right-handed alpha
Helix 28
28
A
412 433Right-handed alpha
Helix 29
29
A
436 451Right-handed alpha
Helix 30
30
A
456 470Right-handed alpha
Helix 31
31
A
470 475Right-handed alpha
Helix 32
32
A
477 482Right-handed alpha
Helix 33
33
A
483 487Right-handed 310
Helix 34
34
A
491 507Right-handed alpha
Helix 35
35
A
509 524Right-handed alpha
Helix 36
36
A
528 545Right-handed alpha
Helix 37
37
A
581 592Right-handed alpha
Helix 38
38
A
593 596Right-handed 310
Helix 39
39
A
597 615Right-handed alpha
Helix 40
40
A
618 634Right-handed alpha
Helix 41
41
A
662 680Right-handed alpha
Helix 42
42
A
692 713Right-handed alpha
Helix 43
43
A
732 760Right-handed alpha
Helix 44
44
A
763 784Right-handed alpha
Helix 45
45
A
805 817Right-handed alpha
Helix 46
46
A
824 833Right-handed alpha
Helix 47
47
A
835 855Right-handed alpha
Helix 48
48
A
865 885Right-handed alpha
Helix 49
49
A
902 921Right-handed alpha
Helix 50
50
A
922 924Right-handed 310
Helix 51
51
A
925 933Right-handed alpha
Helix 52
52
A
945 968Right-handed alpha
Helix 53
53
A
975 989Right-handed alpha
Helix 54
54
A
997 1012Right-handed alpha
Helix 55
55
A
1017 1033Right-handed alpha
Helix 56
56
A
1039 1054Right-handed alpha
Helix 57
57
A
1072 1077Right-handed alpha
Helix 58
58
A
1079 1104Right-handed alpha
Helix 59
59
A
1127 1152Right-handed alpha
Helix 60
60
A
1158 1185Right-handed alpha
Helix 61
61
A
1192 1200Right-handed alpha
Helix 62
62
A
1201 1206Right-handed alpha
Helix 63
63
A
1206 1222Right-handed alpha
Helix 64
64
A
1248 1270Right-handed alpha
Helix 65
65
A
1273 1279Right-handed alpha
Helix 66
66
B
1 12Right-handed alpha
Helix 67
67
B
14 25Right-handed alpha
Helix 68
68
B
28 39Right-handed alpha
Helix 69
69
B
39 45Right-handed alpha
Helix 70
70
B
45 52Right-handed alpha
Helix 71
71
B
58 79Right-handed alpha
Helix 72
72
B
82 97Right-handed alpha
Helix 73
73
B
98 100Right-handed 310
Helix 74
74
B
101 118Right-handed alpha
Helix 75
75
B
128 139Right-handed alpha
Helix 76
76
B
152 167Right-handed alpha
Helix 77
77
B
173 181Right-handed alpha
Helix 78
78
B
182 184Right-handed 310
Helix 79
79
B
187 203Right-handed alpha
Helix 80
80
B
204 205Right-handed 310
Helix 81
81
B
206 208Right-handed 310
Helix 82
82
B
209 222Right-handed alpha
Helix 83
83
B
225 249Right-handed alpha
Helix 84
84
B
260 282Right-handed alpha
Helix 85
85
B
282 294Right-handed alpha
Helix 86
86
B
298 305Right-handed alpha
Helix 87
87
B
306 317Right-handed alpha
Helix 88
88
B
318 321Right-handed 310
Helix 89
89
B
322 345Right-handed alpha
Helix 90
90
B
347 354Right-handed alpha
Helix 91
91
B
359 371Right-handed alpha
Helix 92
92
B
378 394Right-handed alpha
Helix 93
93
B
412 433Right-handed alpha
Helix 94
94
B
436 451Right-handed alpha
Helix 95
95
B
456 470Right-handed alpha
Helix 96
96
B
470 475Right-handed alpha
Helix 97
97
B
477 482Right-handed alpha
Helix 98
98
B
483 487Right-handed 310
Helix 99
99
B
491 507Right-handed alpha
Helix 100
100
B
509 524Right-handed alpha
Helix 101
101
B
528 545Right-handed alpha
Helix 102
102
B
581 592Right-handed alpha
Helix 103
103
B
593 596Right-handed 310
Helix 104
104
B
597 615Right-handed alpha
Helix 105
105
B
618 634Right-handed alpha
Helix 106
106
B
662 680Right-handed alpha
Helix 107
107
B
692 713Right-handed alpha
Helix 108
108
B
732 760Right-handed alpha
Helix 109
109
B
763 784Right-handed alpha
Helix 110
110
B
805 817Right-handed alpha
Helix 111
111
B
824 833Right-handed alpha
Helix 112
112
B
835 855Right-handed alpha
Helix 113
113
B
865 885Right-handed alpha
Helix 114
114
B
902 921Right-handed alpha
Helix 115
115
B
922 924Right-handed 310
Helix 116
116
B
925 933Right-handed alpha
Helix 117
117
B
945 968Right-handed alpha
Helix 118
118
B
975 989Right-handed alpha
Helix 119
119
B
997 1012Right-handed alpha
Helix 120
120
B
1017 1033Right-handed alpha
Helix 121
121
B
1039 1054Right-handed alpha
Helix 122
122
B
1072 1077Right-handed alpha
Helix 123
123
B
1079 1104Right-handed alpha
Helix 124
124
B
1127 1152Right-handed alpha
Helix 125
125
B
1158 1185Right-handed alpha
Helix 126
126
B
1192 1200Right-handed alpha
Helix 127
127
B
1201 1206Right-handed alpha
Helix 128
128
B
1206 1222Right-handed alpha
Helix 129
129
B
1248 1270Right-handed alpha
Helix 130
130
B
1273 1279Right-handed alpha
Helix 131
131
C
1 12Right-handed alpha
Helix 132
132
C
14 25Right-handed alpha
Helix 133
133
C
28 39Right-handed alpha
Helix 134
134
C
39 45Right-handed alpha
Helix 135
135
C
45 52Right-handed alpha
Helix 136
136
C
58 79Right-handed alpha
Helix 137
137
C
82 97Right-handed alpha
Helix 138
138
C
98 100Right-handed 310
Helix 139
139
C
101 118Right-handed alpha
Helix 140
140
C
128 139Right-handed alpha
Helix 141
141
C
152 167Right-handed alpha
Helix 142
142
C
173 181Right-handed alpha
Helix 143
143
C
182 184Right-handed 310
Helix 144
144
C
187 203Right-handed alpha
Helix 145
145
C
204 205Right-handed 310
Helix 146
146
C
206 208Right-handed 310
Helix 147
147
C
209 222Right-handed alpha
Helix 148
148
C
225 249Right-handed alpha
Helix 149
149
C
260 282Right-handed alpha
Helix 150
150
C
282 294Right-handed alpha
Helix 151
151
C
298 305Right-handed alpha
Helix 152
152
C
306 317Right-handed alpha
Helix 153
153
C
318 321Right-handed 310
Helix 154
154
C
322 345Right-handed alpha
Helix 155
155
C
347 354Right-handed alpha
Helix 156
156
C
359 371Right-handed alpha
Helix 157
157
C
378 394Right-handed alpha
Helix 158
158
C
412 433Right-handed alpha
Helix 159
159
C
436 451Right-handed alpha
Helix 160
160
C
456 470Right-handed alpha
Helix 161
161
C
470 475Right-handed alpha
Helix 162
162
C
477 482Right-handed alpha
Helix 163
163
C
483 487Right-handed 310
Helix 164
164
C
491 507Right-handed alpha
Helix 165
165
C
509 524Right-handed alpha
Helix 166
166
C
528 545Right-handed alpha
Helix 167
167
C
581 592Right-handed alpha
Helix 168
168
C
593 596Right-handed 310
Helix 169
169
C
597 615Right-handed alpha
Helix 170
170
C
618 634Right-handed alpha
Helix 171
171
C
662 680Right-handed alpha
Helix 172
172
C
692 713Right-handed alpha
Helix 173
173
C
732 760Right-handed alpha
Helix 174
174
C
763 784Right-handed alpha
Helix 175
175
C
805 817Right-handed alpha
Helix 176
176
C
824 833Right-handed alpha
Helix 177
177
C
835 855Right-handed alpha
Helix 178
178
C
865 885Right-handed alpha
Helix 179
179
C
902 921Right-handed alpha
Helix 180
180
C
922 924Right-handed 310
Helix 181
181
C
925 933Right-handed alpha
Helix 182
182
C
945 968Right-handed alpha
Helix 183
183
C
975 989Right-handed alpha
Helix 184
184
C
997 1012Right-handed alpha
Helix 185
185
C
1017 1033Right-handed alpha
Helix 186
186
C
1039 1054Right-handed alpha
Helix 187
187
C
1072 1077Right-handed alpha
Helix 188
188
C
1079 1104Right-handed alpha
Helix 189
189
C
1127 1152Right-handed alpha
Helix 190
190
C
1158 1185Right-handed alpha
Helix 191
191
C
1192 1200Right-handed alpha
Helix 192
192
C
1201 1206Right-handed alpha
Helix 193
193
C
1206 1222Right-handed alpha
Helix 194
194
C
1248 1270Right-handed alpha
Helix 195
195
C
1273 1279Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3S4Z. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 547first strand
Strand 2
A
566 567parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
650 653first strand
Strand 2
A
656 659anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 547first strand
Strand 2
B
566 567parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
650 653first strand
Strand 2
B
656 659anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
546 547first strand
Strand 2
C
566 567parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
650 653first strand
Strand 2
C
656 659anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il