Analysis of interatomic Contacts of Structural Units in PDB entry:
3S6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3S6D entry

There is 1 chain in PDB entry 3S6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8LEU 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3S6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 40Right-handed alpha
Helix 2
2
A
41 44Right-handed 310
Helix 3
3
A
47 51Right-handed 310
Helix 4
4
A
61 63Right-handed 310
Helix 5
5
A
64 77Right-handed alpha
Helix 6
6
A
111 118Right-handed alpha
Helix 7
7
A
127 135Right-handed alpha
Helix 8
8
A
137 151Right-handed alpha
Helix 9
9
A
168 191Right-handed alpha
Helix 10
10
A
203 207Right-handed 310
Helix 11
11
A
214 234Right-handed alpha
Helix 12
12
A
257 261Right-handed 310
Helix 13
13
A
269 272Right-handed 310
Helix 14
14
A
273 288Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3S6D.

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 21first strand
Strand 2
A
54 59parallel
Strand 3
A
92 95parallel
Strand 4
A
122 125parallel
Strand 5
A
154 159parallel
Strand 6
A
197 201parallel
Strand 7
A
240 248parallel
Strand 8
A
264 267parallel
Strand 9
A
16 21parallel
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