Analysis of interatomic Contacts of Structural Units in PDB entry:
3S9V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3S9V entry

There are 4 chains in PDB entry 3S9V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 110ALA 868
B
 ALA 110ALA 868
C
 ALA 110ALA 868
D
 ALA 110ALA 868
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are160 helices in PDB entry 3S9V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
111 130Right-handed alpha
Helix 2
2
A
138 146Right-handed alpha
Helix 3
3
A
159 169Right-handed alpha
Helix 4
4
A
183 201Right-handed alpha
Helix 5
5
A
204 220Right-handed alpha
Helix 6
6
A
221 225Right-handed 310
Helix 7
7
A
233 248Right-handed alpha
Helix 8
8
A
256 271Right-handed alpha
Helix 9
9
A
274 281Right-handed alpha
Helix 10
10
A
283 292Right-handed 310
Helix 11
11
A
297 303Right-handed alpha
Helix 12
12
A
314 326Right-handed alpha
Helix 13
13
A
327 342Right-handed alpha
Helix 14
14
A
351 366Right-handed alpha
Helix 15
15
A
368 371Right-handed 310
Helix 16
16
A
372 385Right-handed alpha
Helix 17
17
A
402 416Right-handed alpha
Helix 18
18
A
421 429Right-handed 310
Helix 19
19
A
445 457Right-handed alpha
Helix 20
20
A
463 481Right-handed alpha
Helix 21
21
A
495 506Right-handed alpha
Helix 22
22
A
507 511Right-handed 310
Helix 23
23
A
512 524Right-handed alpha
Helix 24
24
A
543 575Right-handed alpha
Helix 25
25
A
586 598Right-handed alpha
Helix 26
26
A
600 602Right-handed 310
Helix 27
27
A
603 625Right-handed alpha
Helix 28
28
A
629 643Right-handed alpha
Helix 29
29
A
647 651Right-handed 310
Helix 30
30
A
652 678Right-handed alpha
Helix 31
31
A
681 705Right-handed alpha
Helix 32
32
A
710 722Right-handed alpha
Helix 33
33
A
723 732Right-handed alpha
Helix 34
34
A
740 745Right-handed alpha
Helix 35
35
A
751 777Right-handed alpha
Helix 36
36
A
781 790Right-handed alpha
Helix 37
37
A
794 820Right-handed alpha
Helix 38
38
A
823 841Right-handed alpha
Helix 39
39
A
850 864Right-handed alpha
Helix 40
40
B
111 129Right-handed alpha
Helix 41
41
B
138 148Right-handed alpha
Helix 42
42
B
159 168Right-handed alpha
Helix 43
43
B
183 201Right-handed alpha
Helix 44
44
B
204 221Right-handed alpha
Helix 45
45
B
222 226Right-handed 310
Helix 46
46
B
233 249Right-handed alpha
Helix 47
47
B
256 273Right-handed alpha
Helix 48
48
B
274 281Right-handed alpha
Helix 49
49
B
283 292Right-handed 310
Helix 50
50
B
297 302Right-handed alpha
Helix 51
51
B
303 305Right-handed 310
Helix 52
52
B
314 326Right-handed alpha
Helix 53
53
B
327 342Right-handed alpha
Helix 54
54
B
351 366Right-handed alpha
Helix 55
55
B
368 371Right-handed 310
Helix 56
56
B
372 386Right-handed alpha
Helix 57
57
B
402 416Right-handed alpha
Helix 58
58
B
421 429Right-handed 310
Helix 59
59
B
445 457Right-handed alpha
Helix 60
60
B
463 482Right-handed alpha
Helix 61
61
B
495 506Right-handed alpha
Helix 62
62
B
507 511Right-handed 310
Helix 63
63
B
512 524Right-handed alpha
Helix 64
64
B
543 574Right-handed alpha
Helix 65
65
B
586 598Right-handed alpha
Helix 66
66
B
600 602Right-handed 310
Helix 67
67
B
603 625Right-handed alpha
Helix 68
68
B
629 643Right-handed alpha
Helix 69
69
B
652 678Right-handed alpha
Helix 70
70
B
681 705Right-handed alpha
Helix 71
71
B
710 722Right-handed alpha
Helix 72
72
B
723 732Right-handed alpha
Helix 73
73
B
733 735Right-handed 310
Helix 74
74
B
740 748Right-handed alpha
Helix 75
75
B
751 777Right-handed alpha
Helix 76
76
B
781 790Right-handed alpha
Helix 77
77
B
794 820Right-handed alpha
Helix 78
78
B
823 841Right-handed alpha
Helix 79
79
B
849 864Right-handed alpha
Helix 80
80
C
111 130Right-handed alpha
Helix 81
81
C
138 146Right-handed alpha
Helix 82
82
C
159 169Right-handed alpha
Helix 83
83
C
183 201Right-handed alpha
Helix 84
84
C
204 220Right-handed alpha
Helix 85
85
C
233 248Right-handed alpha
Helix 86
86
C
256 273Right-handed alpha
Helix 87
87
C
274 281Right-handed alpha
Helix 88
88
C
283 292Right-handed 310
Helix 89
89
C
297 303Right-handed alpha
Helix 90
90
C
314 326Right-handed alpha
Helix 91
91
C
327 342Right-handed alpha
Helix 92
92
C
351 366Right-handed alpha
Helix 93
93
C
368 371Right-handed 310
Helix 94
94
C
372 386Right-handed alpha
Helix 95
95
C
402 416Right-handed alpha
Helix 96
96
C
421 429Right-handed 310
Helix 97
97
C
445 457Right-handed alpha
Helix 98
98
C
463 481Right-handed alpha
Helix 99
99
C
495 506Right-handed alpha
Helix 100
100
C
507 511Right-handed 310
Helix 101
101
C
512 524Right-handed alpha
Helix 102
102
C
543 575Right-handed alpha
Helix 103
103
C
576 580Right-handed 310
Helix 104
104
C
586 598Right-handed alpha
Helix 105
105
C
600 602Right-handed 310
Helix 106
106
C
603 625Right-handed alpha
Helix 107
107
C
629 643Right-handed alpha
Helix 108
108
C
647 651Right-handed 310
Helix 109
109
C
652 678Right-handed alpha
Helix 110
110
C
681 705Right-handed alpha
Helix 111
111
C
710 722Right-handed alpha
Helix 112
112
C
723 732Right-handed alpha
Helix 113
113
C
733 735Right-handed 310
Helix 114
114
C
740 745Right-handed alpha
Helix 115
115
C
751 775Right-handed alpha
Helix 116
116
C
781 790Right-handed alpha
Helix 117
117
C
794 820Right-handed alpha
Helix 118
118
C
823 841Right-handed alpha
Helix 119
119
C
849 864Right-handed alpha
Helix 120
120
D
111 129Right-handed alpha
Helix 121
121
D
138 148Right-handed alpha
Helix 122
122
D
159 169Right-handed alpha
Helix 123
123
D
183 201Right-handed alpha
Helix 124
124
D
204 220Right-handed alpha
Helix 125
125
D
221 225Right-handed 310
Helix 126
126
D
233 249Right-handed alpha
Helix 127
127
D
256 272Right-handed alpha
Helix 128
128
D
274 281Right-handed alpha
Helix 129
129
D
283 296Right-handed 310
Helix 130
130
D
297 302Right-handed alpha
Helix 131
131
D
303 305Right-handed 310
Helix 132
132
D
314 326Right-handed alpha
Helix 133
133
D
327 342Right-handed alpha
Helix 134
134
D
351 366Right-handed alpha
Helix 135
135
D
368 371Right-handed 310
Helix 136
136
D
372 386Right-handed alpha
Helix 137
137
D
402 416Right-handed alpha
Helix 138
138
D
421 429Right-handed 310
Helix 139
139
D
445 457Right-handed alpha
Helix 140
140
D
463 481Right-handed alpha
Helix 141
141
D
495 506Right-handed alpha
Helix 142
142
D
507 511Right-handed 310
Helix 143
143
D
512 524Right-handed alpha
Helix 144
144
D
543 575Right-handed alpha
Helix 145
145
D
576 580Right-handed 310
Helix 146
146
D
586 598Right-handed alpha
Helix 147
147
D
600 602Right-handed 310
Helix 148
148
D
603 625Right-handed alpha
Helix 149
149
D
629 643Right-handed alpha
Helix 150
150
D
652 678Right-handed alpha
Helix 151
151
D
681 705Right-handed alpha
Helix 152
152
D
710 722Right-handed alpha
Helix 153
153
D
723 732Right-handed alpha
Helix 154
154
D
733 735Right-handed 310
Helix 155
155
D
740 745Right-handed alpha
Helix 156
156
D
751 773Right-handed alpha
Helix 157
157
D
781 788Right-handed alpha
Helix 158
158
D
794 820Right-handed alpha
Helix 159
159
D
823 841Right-handed alpha
Helix 160
160
D
850 864Right-handed alpha
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There are 4 sheets in PDB entry 3S9V. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 531first strand
Strand 2
A
535 536anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
530 531first strand
Strand 2
B
535 536anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
530 531first strand
Strand 2
C
535 536anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
530 531first strand
Strand 2
D
535 536anti-parallel
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