Analysis of interatomic Contacts of Structural Units in PDB entry:
3SBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SBA entry

There are 6 chains in PDB entry 3SBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 0TYR 161
B
 PRO 0LYS 162
C
 PRO 0TYR 161
D
 PRO 0LYS 162
E
 PRO 0LYS 162
F
 PRO 0LYS 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3SBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 12Right-handed alpha
Helix 2
2
A
38 51Right-handed alpha
Helix 3
3
A
59 80Right-handed alpha
Helix 4
4
A
84 89Right-handed alpha
Helix 5
5
A
92 113Right-handed alpha
Helix 6
6
A
114 123Right-handed alpha
Helix 7
7
A
125 134Right-handed alpha
Helix 8
8
A
136 142Right-handed alpha
Helix 9
9
A
142 156Right-handed alpha
Helix 10
10
A
157 161Right-handed 310
Helix 11
11
B
2 12Right-handed alpha
Helix 12
12
B
38 51Right-handed alpha
Helix 13
13
B
59 80Right-handed alpha
Helix 14
14
B
84 91Right-handed alpha
Helix 15
15
B
92 113Right-handed alpha
Helix 16
16
B
114 123Right-handed alpha
Helix 17
17
B
125 134Right-handed alpha
Helix 18
18
B
136 142Right-handed alpha
Helix 19
19
B
142 156Right-handed alpha
Helix 20
20
C
2 12Right-handed alpha
Helix 21
21
C
38 51Right-handed alpha
Helix 22
22
C
59 80Right-handed alpha
Helix 23
23
C
84 89Right-handed alpha
Helix 24
24
C
92 107Right-handed alpha
Helix 25
25
C
107 113Right-handed alpha
Helix 26
26
C
114 124Right-handed alpha
Helix 27
27
C
125 134Right-handed alpha
Helix 28
28
C
136 142Right-handed alpha
Helix 29
29
C
142 156Right-handed alpha
Helix 30
30
D
2 11Right-handed alpha
Helix 31
31
D
38 51Right-handed alpha
Helix 32
32
D
59 80Right-handed alpha
Helix 33
33
D
84 91Right-handed alpha
Helix 34
34
D
92 113Right-handed alpha
Helix 35
35
D
114 123Right-handed alpha
Helix 36
36
D
125 134Right-handed alpha
Helix 37
37
D
136 142Right-handed alpha
Helix 38
38
D
142 156Right-handed alpha
Helix 39
39
E
2 12Right-handed alpha
Helix 40
40
E
38 51Right-handed alpha
Helix 41
41
E
59 80Right-handed alpha
Helix 42
42
E
84 89Right-handed alpha
Helix 43
43
E
92 112Right-handed alpha
Helix 44
44
E
114 123Right-handed alpha
Helix 45
45
E
125 134Right-handed alpha
Helix 46
46
E
136 142Right-handed alpha
Helix 47
47
E
142 156Right-handed alpha
Helix 48
48
E
158 162Right-handed 310
Helix 49
49
F
2 12Right-handed alpha
Helix 50
50
F
38 51Right-handed alpha
Helix 51
51
F
59 80Right-handed alpha
Helix 52
52
F
84 89Right-handed alpha
Helix 53
53
F
92 113Right-handed alpha
Helix 54
54
F
114 123Right-handed alpha
Helix 55
55
F
125 134Right-handed alpha
Helix 56
56
F
136 142Right-handed alpha
Helix 57
57
F
142 156Right-handed alpha
Helix 58
58
F
158 162Right-handed 310
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There are 6 sheets in PDB entry 3SBA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 19first strand
Strand 2
A
25 28anti-parallel
Strand 3
A
31 34anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 19first strand
Strand 2
B
25 28anti-parallel
Strand 3
B
31 34anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 19first strand
Strand 2
C
25 28anti-parallel
Strand 3
C
31 34anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
14 19first strand
Strand 2
D
25 28anti-parallel
Strand 3
D
31 34anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
14 19first strand
Strand 2
E
25 28anti-parallel
Strand 3
E
31 34anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
14 19first strand
Strand 2
F
25 28anti-parallel
Strand 3
F
31 34anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il