Analysis of interatomic Contacts of Structural Units in PDB entry:
3SBC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SBC entry

There are 10 chains in PDB entry 3SBC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1LYS 195
B
 HIS -1LYS 195
C
 MET 0LYS 195
D
 VAL 1ASN 194
E
 VAL 1LYS 195
F
 VAL 1ASN 194
G
 VAL 1LYS 195
H
 VAL 1LYS 195
I
 VAL 1LYS 195
J
 VAL 1LYS 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 3SBC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
25 30Right-handed 310
Helix 2
2
A
45 64Right-handed alpha
Helix 3
3
A
75 84Right-handed alpha
Helix 4
4
A
86 90Right-handed 310
Helix 5
5
A
105 112Right-handed alpha
Helix 6
6
A
147 165Right-handed alpha
Helix 7
7
A
185 194Right-handed alpha
Helix 8
8
B
27 30Right-handed 310
Helix 9
9
B
45 57Right-handed alpha
Helix 10
10
B
57 64Right-handed alpha
Helix 11
11
B
75 84Right-handed alpha
Helix 12
12
B
86 90Right-handed 310
Helix 13
13
B
105 111Right-handed alpha
Helix 14
14
B
147 165Right-handed alpha
Helix 15
15
B
182 193Right-handed alpha
Helix 16
16
C
25 30Right-handed 310
Helix 17
17
C
45 57Right-handed alpha
Helix 18
18
C
57 63Right-handed alpha
Helix 19
19
C
75 84Right-handed alpha
Helix 20
20
C
85 90Right-handed 310
Helix 21
21
C
105 112Right-handed alpha
Helix 22
22
C
147 165Right-handed alpha
Helix 23
23
C
182 193Right-handed alpha
Helix 24
24
D
25 30Right-handed 310
Helix 25
25
D
45 57Right-handed alpha
Helix 26
26
D
57 63Right-handed alpha
Helix 27
27
D
75 84Right-handed alpha
Helix 28
28
D
85 90Right-handed 310
Helix 29
29
D
105 111Right-handed alpha
Helix 30
30
D
147 165Right-handed alpha
Helix 31
31
D
185 194Right-handed alpha
Helix 32
32
E
27 30Right-handed 310
Helix 33
33
E
45 57Right-handed alpha
Helix 34
34
E
57 64Right-handed alpha
Helix 35
35
E
75 81Right-handed alpha
Helix 36
36
E
86 90Right-handed 310
Helix 37
37
E
105 111Right-handed alpha
Helix 38
38
E
147 165Right-handed alpha
Helix 39
39
E
186 193Right-handed alpha
Helix 40
40
F
27 30Right-handed 310
Helix 41
41
F
45 64Right-handed alpha
Helix 42
42
F
75 85Right-handed alpha
Helix 43
43
F
86 90Right-handed 310
Helix 44
44
F
105 111Right-handed alpha
Helix 45
45
F
147 165Right-handed alpha
Helix 46
46
F
182 193Right-handed alpha
Helix 47
47
G
25 30Right-handed 310
Helix 48
48
G
46 57Right-handed alpha
Helix 49
49
G
57 63Right-handed alpha
Helix 50
50
G
75 84Right-handed alpha
Helix 51
51
G
86 90Right-handed 310
Helix 52
52
G
105 111Right-handed alpha
Helix 53
53
G
147 165Right-handed alpha
Helix 54
54
G
182 194Right-handed alpha
Helix 55
55
H
27 30Right-handed 310
Helix 56
56
H
45 63Right-handed alpha
Helix 57
57
H
75 84Right-handed alpha
Helix 58
58
H
85 90Right-handed 310
Helix 59
59
H
105 111Right-handed alpha
Helix 60
60
H
147 165Right-handed alpha
Helix 61
61
H
182 194Right-handed alpha
Helix 62
62
I
27 30Right-handed 310
Helix 63
63
I
45 57Right-handed alpha
Helix 64
64
I
57 63Right-handed alpha
Helix 65
65
I
75 84Right-handed alpha
Helix 66
66
I
85 90Right-handed 310
Helix 67
67
I
105 111Right-handed alpha
Helix 68
68
I
147 165Right-handed alpha
Helix 69
69
I
185 194Right-handed alpha
Helix 70
70
J
25 30Right-handed 310
Helix 71
71
J
45 57Right-handed alpha
Helix 72
72
J
57 63Right-handed alpha
Helix 73
73
J
75 84Right-handed alpha
Helix 74
74
J
86 90Right-handed 310
Helix 75
75
J
105 111Right-handed alpha
Helix 76
76
J
147 165Right-handed alpha
Helix 77
77
J
186 194Right-handed alpha
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There are 5 sheets in PDB entry 3SBC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 24first strand
Strand 2
A
13 17anti-parallel
Strand 3
A
99 101anti-parallel
Strand 4
A
66 72parallel
Strand 5
A
33 38parallel
Strand 6
A
123 128anti-parallel
Strand 7
A
134 140anti-parallel
Strand 8
B
134 140anti-parallel
Strand 9
B
123 128anti-parallel
Strand 10
B
33 38anti-parallel
Strand 11
B
66 72parallel
Strand 12
B
99 101parallel
Strand 13
B
12 17anti-parallel
Strand 14
B
20 25anti-parallel
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There are 14 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 24first strand
Strand 2
C
13 16anti-parallel
Strand 3
C
99 101anti-parallel
Strand 4
C
66 72parallel
Strand 5
C
33 38parallel
Strand 6
C
123 128anti-parallel
Strand 7
C
134 140anti-parallel
Strand 8
D
134 140anti-parallel
Strand 9
D
125 128anti-parallel
Strand 10
D
33 38anti-parallel
Strand 11
D
66 72parallel
Strand 12
D
99 101parallel
Strand 13
D
13 17anti-parallel
Strand 14
D
20 24anti-parallel
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There are 14 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
20 25first strand
Strand 2
E
12 17anti-parallel
Strand 3
E
99 101anti-parallel
Strand 4
E
66 72parallel
Strand 5
E
33 38parallel
Strand 6
E
123 128anti-parallel
Strand 7
E
134 140anti-parallel
Strand 8
F
134 140anti-parallel
Strand 9
F
123 128anti-parallel
Strand 10
F
33 38anti-parallel
Strand 11
F
66 72parallel
Strand 12
F
99 101parallel
Strand 13
F
12 17anti-parallel
Strand 14
F
20 25anti-parallel
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There are 14 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
20 24first strand
Strand 2
G
13 17anti-parallel
Strand 3
G
99 101anti-parallel
Strand 4
G
66 72parallel
Strand 5
G
33 38parallel
Strand 6
G
123 128anti-parallel
Strand 7
G
134 140anti-parallel
Strand 8
H
134 140anti-parallel
Strand 9
H
123 128anti-parallel
Strand 10
H
33 39anti-parallel
Strand 11
H
66 72parallel
Strand 12
H
99 101parallel
Strand 13
H
12 17anti-parallel
Strand 14
H
20 25anti-parallel
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There are 14 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
20 25first strand
Strand 2
I
12 17anti-parallel
Strand 3
I
99 101anti-parallel
Strand 4
I
66 72parallel
Strand 5
I
33 39parallel
Strand 6
I
123 128anti-parallel
Strand 7
I
134 140anti-parallel
Strand 8
J
134 140anti-parallel
Strand 9
J
123 128anti-parallel
Strand 10
J
33 38anti-parallel
Strand 11
J
66 72parallel
Strand 12
J
99 101parallel
Strand 13
J
13 17anti-parallel
Strand 14
J
20 24anti-parallel
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