Analysis of interatomic Contacts of Structural Units in PDB entry:
3SBX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SBX entry

There are 8 chains in PDB entry 3SBX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ARG 10PRO 186
B
ARG 10PRO 186
C
ARG 10PRO 186
D
ARG 10PRO 186
E
ARG 10PRO 186
F
ARG 10PRO 186
G
ARG 10PRO 186
H
ARG 10ASP 124
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 3SBX. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
23 40Right-handed alpha
Helix 2
2
A
51 63Right-handed alpha
Helix 3
3
A
94 106Right-handed alpha
Helix 4
4
A
115 131Right-handed alpha
Helix 5
5
A
147 160Right-handed alpha
Helix 6
6
A
164 170Right-handed alpha
Helix 7
7
A
176 185Right-handed alpha
Helix 8
8
B
23 40Right-handed alpha
Helix 9
9
B
51 64Right-handed alpha
Helix 10
10
B
75 77Right-handed 310
Helix 11
11
B
94 106Right-handed alpha
Helix 12
12
B
115 131Right-handed alpha
Helix 13
13
B
147 160Right-handed alpha
Helix 14
14
B
164 169Right-handed alpha
Helix 15
15
B
176 185Right-handed alpha
Helix 16
16
C
23 40Right-handed alpha
Helix 17
17
C
51 64Right-handed alpha
Helix 18
18
C
75 77Right-handed 310
Helix 19
19
C
94 106Right-handed alpha
Helix 20
20
C
115 131Right-handed alpha
Helix 21
21
C
147 160Right-handed alpha
Helix 22
22
C
164 170Right-handed alpha
Helix 23
23
C
176 185Right-handed alpha
Helix 24
24
D
23 40Right-handed alpha
Helix 25
25
D
51 64Right-handed alpha
Helix 26
26
D
75 77Right-handed 310
Helix 27
27
D
94 106Right-handed alpha
Helix 28
28
D
115 131Right-handed alpha
Helix 29
29
D
147 160Right-handed alpha
Helix 30
30
D
164 170Right-handed alpha
Helix 31
31
D
176 185Right-handed alpha
Helix 32
32
E
23 40Right-handed alpha
Helix 33
33
E
51 64Right-handed alpha
Helix 34
34
E
94 105Right-handed alpha
Helix 35
35
E
115 131Right-handed alpha
Helix 36
36
E
147 159Right-handed alpha
Helix 37
37
E
164 169Right-handed alpha
Helix 38
38
E
176 184Right-handed alpha
Helix 39
39
F
23 40Right-handed alpha
Helix 40
40
F
51 64Right-handed alpha
Helix 41
41
F
75 77Right-handed 310
Helix 42
42
F
94 106Right-handed alpha
Helix 43
43
F
115 131Right-handed alpha
Helix 44
44
F
147 159Right-handed alpha
Helix 45
45
F
164 169Right-handed alpha
Helix 46
46
F
176 185Right-handed alpha
Helix 47
47
G
23 40Right-handed alpha
Helix 48
48
G
51 63Right-handed alpha
Helix 49
49
G
95 106Right-handed alpha
Helix 50
50
G
115 131Right-handed alpha
Helix 51
51
G
147 160Right-handed alpha
Helix 52
52
G
164 170Right-handed alpha
Helix 53
53
G
176 185Right-handed alpha
Helix 54
54
H
23 40Right-handed alpha
Helix 55
55
H
51 64Right-handed alpha
Helix 56
56
H
75 77Right-handed 310
Helix 57
57
H
94 106Right-handed alpha
Helix 58
58
H
115 131Right-handed alpha
Helix 59
59
H
147 160Right-handed alpha
Helix 60
60
H
164 170Right-handed alpha
Helix 61
61
H
176 185Right-handed alpha
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There are 8 sheets in PDB entry 3SBX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
88 92first strand
Strand 2
A
68 73parallel
Strand 3
A
43 46parallel
Strand 4
A
12 16parallel
Strand 5
A
108 111parallel
Strand 6
A
138 141parallel
Strand 7
A
171 174parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
88 92first strand
Strand 2
B
68 73parallel
Strand 3
B
43 46parallel
Strand 4
B
12 16parallel
Strand 5
B
108 111parallel
Strand 6
B
138 141parallel
Strand 7
B
171 174parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
88 92first strand
Strand 2
C
68 73parallel
Strand 3
C
43 46parallel
Strand 4
C
12 16parallel
Strand 5
C
108 111parallel
Strand 6
C
138 141parallel
Strand 7
C
171 174parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
88 92first strand
Strand 2
D
68 73parallel
Strand 3
D
43 46parallel
Strand 4
D
12 16parallel
Strand 5
D
108 111parallel
Strand 6
D
137 141parallel
Strand 7
D
171 174parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
88 92first strand
Strand 2
E
68 73parallel
Strand 3
E
43 46parallel
Strand 4
E
12 16parallel
Strand 5
E
108 111parallel
Strand 6
E
138 141parallel
Strand 7
E
171 174parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
88 92first strand
Strand 2
F
68 73parallel
Strand 3
F
43 46parallel
Strand 4
F
12 16parallel
Strand 5
F
108 111parallel
Strand 6
F
138 141parallel
Strand 7
F
171 174parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
88 92first strand
Strand 2
G
68 73parallel
Strand 3
G
43 46parallel
Strand 4
G
12 16parallel
Strand 5
G
108 111parallel
Strand 6
G
137 141parallel
Strand 7
G
171 174parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
88 92first strand
Strand 2
H
68 73parallel
Strand 3
H
43 46parallel
Strand 4
H
12 16parallel
Strand 5
H
108 111parallel
Strand 6
H
137 141parallel
Strand 7
H
171 174parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il