Analysis of interatomic Contacts of Structural Units in PDB entry:
3SC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SC7 entry

There is 1 chain in PDB entry 3SC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 GLN 24GLU 516
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3SC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
159 164Right-handed alpha
Helix 2
2
X
195 197Right-handed 310
Helix 3
3
X
220 222Right-handed 310
Helix 4
4
X
358 362Right-handed 310
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There are 8 sheets in PDB entry 3SC7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
84 90first strand
Strand 2
X
71 77anti-parallel
Strand 3
X
53 61anti-parallel
Strand 4
X
39 50anti-parallel
Strand 5
X
331 332parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
96 105first strand
Strand 2
X
121 129anti-parallel
Strand 3
X
135 142anti-parallel
Strand 4
X
150 151anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
175 182first strand
Strand 2
X
187 193anti-parallel
Strand 3
X
199 205anti-parallel
Strand 4
X
212 218anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
236 241first strand
Strand 2
X
248 254anti-parallel
Strand 3
X
268 274anti-parallel
Strand 4
X
279 281anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
298 302first strand
Strand 2
X
314 319anti-parallel
Strand 3
X
334 335anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
298 302first strand
Strand 2
X
314 319anti-parallel
Strand 3
X
339 346anti-parallel
Strand 4
X
349 356anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
364 375first strand
Strand 2
X
503 513anti-parallel
Strand 3
X
390 398anti-parallel
Strand 4
X
459 466anti-parallel
Strand 5
X
469 474anti-parallel
Strand 6
X
479 484anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
446 450first strand
Strand 2
X
426 430anti-parallel
Strand 3
X
416 421anti-parallel
Strand 4
X
403 410anti-parallel
Strand 5
X
493 499anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il