Analysis of interatomic Contacts of Structural Units in PDB entry:
3SDV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SDV entry

There is 1 chain in PDB entry 3SDV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 35LEU 817
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 3SDV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 42Right-handed alpha
Helix 2
2
A
45 48Right-handed 310
Helix 3
3
A
49 72Right-handed alpha
Helix 4
4
A
82 90Right-handed alpha
Helix 5
5
A
103 113Right-handed alpha
Helix 6
6
A
127 145Right-handed alpha
Helix 7
7
A
148 164Right-handed alpha
Helix 8
8
A
168 172Right-handed 310
Helix 9
9
A
178 193Right-handed alpha
Helix 10
10
A
201 217Right-handed alpha
Helix 11
11
A
219 224Right-handed alpha
Helix 12
12
A
228 237Right-handed 310
Helix 13
13
A
242 250Right-handed 310
Helix 14
14
A
259 271Right-handed alpha
Helix 15
15
A
272 287Right-handed alpha
Helix 16
16
A
296 311Right-handed alpha
Helix 17
17
A
313 316Right-handed 310
Helix 18
18
A
317 331Right-handed alpha
Helix 19
19
A
347 361Right-handed alpha
Helix 20
20
A
366 374Right-handed 310
Helix 21
21
A
386 402Right-handed alpha
Helix 22
22
A
408 428Right-handed alpha
Helix 23
23
A
429 432Right-handed 310
Helix 24
24
A
433 439Right-handed alpha
Helix 25
25
A
440 451Right-handed alpha
Helix 26
26
A
457 467Right-handed alpha
Helix 27
27
A
488 520Right-handed alpha
Helix 28
28
A
521 525Right-handed 310
Helix 29
29
A
531 541Right-handed alpha
Helix 30
30
A
545 547Right-handed 310
Helix 31
31
A
548 571Right-handed alpha
Helix 32
32
A
574 588Right-handed alpha
Helix 33
33
A
589 596Right-handed 310
Helix 34
34
A
597 623Right-handed alpha
Helix 35
35
A
626 650Right-handed alpha
Helix 36
36
A
655 667Right-handed alpha
Helix 37
37
A
668 678Right-handed alpha
Helix 38
38
A
686 692Right-handed alpha
Helix 39
39
A
700 717Right-handed alpha
Helix 40
40
A
729 738Right-handed alpha
Helix 41
41
A
742 767Right-handed alpha
Helix 42
42
A
772 790Right-handed alpha
Helix 43
43
A
799 812Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3SDV.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
475 476first strand
Strand 2
A
480 481anti-parallel
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