Analysis of interatomic Contacts of Structural Units in PDB entry:
3SFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SFZ entry

There is 1 chain in PDB entry 3SFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 102GLU 1249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3SFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
108 117Right-handed alpha
Helix 2
2
A
129 142Right-handed alpha
Helix 3
3
A
159 168Right-handed alpha
Helix 4
4
A
170 175Right-handed alpha
Helix 5
5
A
191 207Right-handed alpha
Helix 6
6
A
219 231Right-handed alpha
Helix 7
7
A
247 252Right-handed alpha
Helix 8
8
A
287 300Right-handed alpha
Helix 9
9
A
308 317Right-handed alpha
Helix 10
10
A
320 334Right-handed alpha
Helix 11
11
A
337 347Right-handed alpha
Helix 12
12
A
360 374Right-handed alpha
Helix 13
13
A
379 386Right-handed alpha
Helix 14
14
A
387 389Right-handed 310
Helix 15
15
A
397 405Right-handed alpha
Helix 16
16
A
407 421Right-handed alpha
Helix 17
17
A
438 449Right-handed alpha
Helix 18
18
A
452 466Right-handed alpha
Helix 19
19
A
479 494Right-handed alpha
Helix 20
20
A
496 505Right-handed alpha
Helix 21
21
A
506 518Right-handed alpha
Helix 22
22
A
519 529Right-handed alpha
Helix 23
23
A
539 553Right-handed alpha
Helix 24
24
A
562 569Right-handed alpha
Helix 25
25
A
574 586Right-handed alpha
Helix 26
26
A
597 601Right-handed 310
Helix 27
27
A
773 775Right-handed 310
Helix 28
28
A
911 916Right-handed alpha
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There are 17 sheets in PDB entry 3SFZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 186first strand
Strand 2
A
239 243parallel
Strand 3
A
259 264parallel
Strand 4
A
148 153parallel
Strand 5
A
280 281parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 396first strand
Strand 2
A
433 436anti-parallel
Strand 3
A
425 428anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
609 611first strand
Strand 2
A
906 910anti-parallel
Strand 3
A
896 901anti-parallel
Strand 4
A
885 890anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
618 623first strand
Strand 2
A
629 634anti-parallel
Strand 3
A
639 643anti-parallel
Strand 4
A
649 653anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 665first strand
Strand 2
A
671 676anti-parallel
Strand 3
A
680 685anti-parallel
Strand 4
A
691 696anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 707first strand
Strand 2
A
715 720anti-parallel
Strand 3
A
725 729anti-parallel
Strand 4
A
735 739anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
746 751first strand
Strand 2
A
757 762anti-parallel
Strand 3
A
766 771anti-parallel
Strand 4
A
777 782anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
812 817first strand
Strand 2
A
820 825anti-parallel
Strand 3
A
831 836anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
845 848first strand
Strand 2
A
854 858anti-parallel
Strand 3
A
864 868anti-parallel
Strand 4
A
873 878anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
922 931first strand
Strand 2
A
934 941anti-parallel
Strand 3
A
946 951anti-parallel
Strand 4
A
956 959anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
964 969first strand
Strand 2
A
975 980anti-parallel
Strand 3
A
986 989anti-parallel
Strand 4
A
996 998anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1009 1011first strand
Strand 2
A
1018 1021anti-parallel
Strand 3
A
1027 1030anti-parallel
Strand 4
A
1037 1038anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1047 1052first strand
Strand 2
A
1057 1062anti-parallel
Strand 3
A
1066 1071anti-parallel
Strand 4
A
1079 1082anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1091 1093first strand
Strand 2
A
1101 1103anti-parallel
Strand 3
A
1111 1112anti-parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1130 1135first strand
Strand 2
A
1141 1146anti-parallel
Strand 3
A
1153 1155anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1183 1186first strand
Strand 2
A
1193 1196anti-parallel
Strand 3
A
1200 1202anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1225 1226first strand
Strand 2
A
1233 1236anti-parallel
Strand 3
A
1242 1245anti-parallel
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