Analysis of interatomic Contacts of Structural Units in PDB entry:
3SH2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SH2 entry

There are 2 chains in PDB entry 3SH2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1LYS 157
B
 THR 1LYS 157
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3SH2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 36Right-handed alpha
Helix 2
2
A
44 51Right-handed alpha
Helix 3
3
A
79 85Right-handed 310
Helix 4
4
A
94 102Right-handed alpha
Helix 5
5
B
24 36Right-handed alpha
Helix 6
6
B
44 51Right-handed alpha
Helix 7
7
B
78 85Right-handed 310
Helix 8
8
B
94 102Right-handed alpha
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There are 4 sheets in PDB entry 3SH2. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 76first strand
Strand 2
A
58 62parallel
Strand 3
A
39 43parallel
Strand 4
A
89 93parallel
Strand 5
A
2 9parallel
Strand 6
A
107 113parallel
Strand 7
A
149 156anti-parallel
Strand 8
A
131 138anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
121 122anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 76first strand
Strand 2
B
58 62parallel
Strand 3
B
39 43parallel
Strand 4
B
89 93parallel
Strand 5
B
2 9parallel
Strand 6
B
107 113parallel
Strand 7
B
149 156anti-parallel
Strand 8
B
131 138anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
121 122anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il