Analysis of interatomic Contacts of Structural Units in PDB entry:
3SHM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SHM entry

There are 20 chains in PDB entry 3SHM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 221LEU 736
B
 VAL 221LEU 736
C
 VAL 221LEU 736
D
 VAL 221LEU 736
E
 VAL 221LEU 736
F
 VAL 221LEU 736
G
 VAL 221LEU 736
H
 VAL 221LEU 736
I
 VAL 221LEU 736
J
 VAL 221LEU 736
K
 VAL 221LEU 736
L
 VAL 221LEU 736
M
 VAL 221LEU 736
N
 VAL 221LEU 736
O
 VAL 221LEU 736
P
 VAL 221LEU 736
Q
 VAL 221LEU 736
R
 VAL 221LEU 736
S
 VAL 221LEU 736
T
 VAL 221LEU 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are120 helices in PDB entry 3SHM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
287 291Right-handed 310
Helix 2
2
A
293 303Right-handed alpha
Helix 3
3
A
395 399Right-handed 310
Helix 4
4
A
492 496Right-handed 310
Helix 5
5
A
500 505Right-handed alpha
Helix 6
6
A
554 558Right-handed 310
Helix 7
7
B
287 291Right-handed 310
Helix 8
8
B
293 303Right-handed alpha
Helix 9
9
B
395 399Right-handed 310
Helix 10
10
B
492 496Right-handed 310
Helix 11
11
B
500 505Right-handed alpha
Helix 12
12
B
554 558Right-handed 310
Helix 13
13
C
287 291Right-handed 310
Helix 14
14
C
293 303Right-handed alpha
Helix 15
15
C
395 399Right-handed 310
Helix 16
16
C
492 496Right-handed 310
Helix 17
17
C
500 505Right-handed alpha
Helix 18
18
C
554 558Right-handed 310
Helix 19
19
D
287 291Right-handed 310
Helix 20
20
D
293 303Right-handed alpha
Helix 21
21
D
395 399Right-handed 310
Helix 22
22
D
492 496Right-handed 310
Helix 23
23
D
500 505Right-handed alpha
Helix 24
24
D
554 558Right-handed 310
Helix 25
25
E
287 291Right-handed 310
Helix 26
26
E
293 303Right-handed alpha
Helix 27
27
E
395 399Right-handed 310
Helix 28
28
E
492 496Right-handed 310
Helix 29
29
E
500 505Right-handed alpha
Helix 30
30
E
554 558Right-handed 310
Helix 31
31
F
287 291Right-handed 310
Helix 32
32
F
293 303Right-handed alpha
Helix 33
33
F
395 399Right-handed 310
Helix 34
34
F
492 496Right-handed 310
Helix 35
35
F
500 505Right-handed alpha
Helix 36
36
F
554 558Right-handed 310
Helix 37
37
G
287 291Right-handed 310
Helix 38
38
G
293 303Right-handed alpha
Helix 39
39
G
395 399Right-handed 310
Helix 40
40
G
492 496Right-handed 310
Helix 41
41
G
500 505Right-handed alpha
Helix 42
42
G
554 558Right-handed 310
Helix 43
43
H
287 291Right-handed 310
Helix 44
44
H
293 303Right-handed alpha
Helix 45
45
H
395 399Right-handed 310
Helix 46
46
H
492 496Right-handed 310
Helix 47
47
H
500 505Right-handed alpha
Helix 48
48
H
554 558Right-handed 310
Helix 49
49
I
287 291Right-handed 310
Helix 50
50
I
293 303Right-handed alpha
Helix 51
51
I
395 399Right-handed 310
Helix 52
52
I
492 496Right-handed 310
Helix 53
53
I
500 505Right-handed alpha
Helix 54
54
I
554 558Right-handed 310
Helix 55
55
J
287 291Right-handed 310
Helix 56
56
J
293 303Right-handed alpha
Helix 57
57
J
395 399Right-handed 310
Helix 58
58
J
492 496Right-handed 310
Helix 59
59
J
500 505Right-handed alpha
Helix 60
60
J
554 558Right-handed 310
Helix 61
61
K
287 291Right-handed 310
Helix 62
62
K
293 303Right-handed alpha
Helix 63
63
K
395 399Right-handed 310
Helix 64
64
K
492 496Right-handed 310
Helix 65
65
K
500 505Right-handed alpha
Helix 66
66
K
554 558Right-handed 310
Helix 67
67
L
287 291Right-handed 310
Helix 68
68
L
293 303Right-handed alpha
Helix 69
69
L
395 399Right-handed 310
Helix 70
70
L
492 496Right-handed 310
Helix 71
71
L
500 505Right-handed alpha
Helix 72
72
L
554 558Right-handed 310
Helix 73
73
M
287 291Right-handed 310
Helix 74
74
M
293 303Right-handed alpha
Helix 75
75
M
395 399Right-handed 310
Helix 76
76
M
492 496Right-handed 310
Helix 77
77
M
500 505Right-handed alpha
Helix 78
78
M
554 558Right-handed 310
Helix 79
79
N
287 291Right-handed 310
Helix 80
80
N
293 303Right-handed alpha
Helix 81
81
N
395 399Right-handed 310
Helix 82
82
N
492 496Right-handed 310
Helix 83
83
N
500 505Right-handed alpha
Helix 84
84
N
554 558Right-handed 310
Helix 85
85
O
287 291Right-handed 310
Helix 86
86
O
293 303Right-handed alpha
Helix 87
87
O
395 399Right-handed 310
Helix 88
88
O
492 496Right-handed 310
Helix 89
89
O
500 505Right-handed alpha
Helix 90
90
O
554 558Right-handed 310
Helix 91
91
P
287 291Right-handed 310
Helix 92
92
P
293 303Right-handed alpha
Helix 93
93
P
395 399Right-handed 310
Helix 94
94
P
492 496Right-handed 310
Helix 95
95
P
500 505Right-handed alpha
Helix 96
96
P
554 558Right-handed 310
Helix 97
97
Q
287 291Right-handed 310
Helix 98
98
Q
293 303Right-handed alpha
Helix 99
99
Q
395 399Right-handed 310
Helix 100
100
Q
492 496Right-handed 310
Helix 101
101
Q
500 505Right-handed alpha
Helix 102
102
Q
554 558Right-handed 310
Helix 103
103
R
287 291Right-handed 310
Helix 104
104
R
293 303Right-handed alpha
Helix 105
105
R
395 399Right-handed 310
Helix 106
106
R
492 496Right-handed 310
Helix 107
107
R
500 505Right-handed alpha
Helix 108
108
R
554 558Right-handed 310
Helix 109
109
S
287 291Right-handed 310
Helix 110
110
S
293 303Right-handed alpha
Helix 111
111
S
395 399Right-handed 310
Helix 112
112
S
492 496Right-handed 310
Helix 113
113
S
500 505Right-handed alpha
Helix 114
114
S
554 558Right-handed 310
Helix 115
115
T
287 291Right-handed 310
Helix 116
116
T
293 303Right-handed alpha
Helix 117
117
T
395 399Right-handed 310
Helix 118
118
T
492 496Right-handed 310
Helix 119
119
T
500 505Right-handed alpha
Helix 120
120
T
554 558Right-handed 310
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