Analysis of interatomic Contacts of Structural Units in PDB entry:
3SHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SHO entry

There are 8 chains in PDB entry 3SHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 96ILE 131
A
 ARG 133MSE 282
B
 GLN 98ILE 131
B
 ARG 133LEU 276
C
 ASP 96ILE 131
C
 ARG 133GLN 280
D
 ARG 97ILE 131
D
 ARG 133LEU 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 3SHO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
96 98Right-handed 310
Helix 2
2
A
99 118Right-handed alpha
Helix 3
3
A
120 134Right-handed alpha
Helix 4
4
A
142 144Right-handed 310
Helix 5
5
A
145 159Right-handed alpha
Helix 6
6
A
170 179Right-handed alpha
Helix 7
7
A
195 208Right-handed alpha
Helix 8
8
A
221 227Right-handed alpha
Helix 9
9
A
244 262Right-handed alpha
Helix 10
10
A
262 281Right-handed alpha
Helix 11
11
B
99 118Right-handed alpha
Helix 12
12
B
120 134Right-handed alpha
Helix 13
13
B
145 159Right-handed alpha
Helix 14
14
B
170 179Right-handed alpha
Helix 15
15
B
195 208Right-handed alpha
Helix 16
16
B
221 227Right-handed alpha
Helix 17
17
B
244 262Right-handed alpha
Helix 18
18
B
262 276Right-handed alpha
Helix 19
19
C
96 98Right-handed 310
Helix 20
20
C
99 118Right-handed alpha
Helix 21
21
C
120 134Right-handed alpha
Helix 22
22
C
145 159Right-handed alpha
Helix 23
23
C
169 179Right-handed alpha
Helix 24
24
C
195 208Right-handed alpha
Helix 25
25
C
221 227Right-handed alpha
Helix 26
26
C
244 262Right-handed alpha
Helix 27
27
C
262 280Right-handed alpha
Helix 28
28
D
99 118Right-handed alpha
Helix 29
29
D
120 134Right-handed alpha
Helix 30
30
D
145 159Right-handed alpha
Helix 31
31
D
169 179Right-handed alpha
Helix 32
32
D
195 208Right-handed alpha
Helix 33
33
D
221 227Right-handed alpha
Helix 34
34
D
244 262Right-handed alpha
Helix 35
35
D
262 276Right-handed alpha
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There are 4 sheets in PDB entry 3SHO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 166first strand
Strand 2
A
136 140parallel
Strand 3
A
184 189parallel
Strand 4
A
212 216parallel
Strand 5
A
229 232parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
163 166first strand
Strand 2
B
136 141parallel
Strand 3
B
184 189parallel
Strand 4
B
212 216parallel
Strand 5
B
229 232parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
163 166first strand
Strand 2
C
136 141parallel
Strand 3
C
184 190parallel
Strand 4
C
212 216parallel
Strand 5
C
229 232parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
163 166first strand
Strand 2
D
136 141parallel
Strand 3
D
184 190parallel
Strand 4
D
212 216parallel
Strand 5
D
229 232parallel
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