Analysis of interatomic Contacts of Structural Units in PDB entry:
3SJB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SJB entry

There are 4 chains in PDB entry 3SJB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4GLU 354
B
 THR 4GLU 354
C
 GLU 37HIS 99
D
 ASN 36HIS 107
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3SJB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 15Right-handed alpha
Helix 2
2
A
30 46Right-handed alpha
Helix 3
3
A
61 67Right-handed alpha
Helix 4
4
A
89 98Right-handed alpha
Helix 5
5
A
135 157Right-handed alpha
Helix 6
6
A
174 178Right-handed 310
Helix 7
7
A
214 231Right-handed alpha
Helix 8
8
A
245 262Right-handed alpha
Helix 9
9
A
276 280Right-handed 310
Helix 10
10
A
285 304Right-handed alpha
Helix 11
11
A
323 332Right-handed alpha
Helix 12
12
A
333 335Right-handed 310
Helix 13
13
A
339 354Right-handed alpha
Helix 14
14
B
9 15Right-handed alpha
Helix 15
15
B
30 46Right-handed alpha
Helix 16
16
B
61 67Right-handed alpha
Helix 17
17
B
89 101Right-handed alpha
Helix 18
18
B
124 130Right-handed alpha
Helix 19
19
B
135 157Right-handed alpha
Helix 20
20
B
174 177Right-handed 310
Helix 21
21
B
178 189Right-handed alpha
Helix 22
22
B
217 231Right-handed alpha
Helix 23
23
B
245 262Right-handed alpha
Helix 24
24
B
276 280Right-handed 310
Helix 25
25
B
285 304Right-handed alpha
Helix 26
26
B
323 332Right-handed alpha
Helix 27
27
B
333 335Right-handed 310
Helix 28
28
B
339 354Right-handed alpha
Helix 29
29
C
37 57Right-handed alpha
Helix 30
30
C
64 99Right-handed alpha
Helix 31
31
D
36 57Right-handed alpha
Helix 32
32
D
64 107Right-handed alpha
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There are 2 sheets in PDB entry 3SJB. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
51 55parallel
Strand 4
A
162 166parallel
Strand 5
A
20 24parallel
Strand 6
A
236 243parallel
Strand 7
A
265 274parallel
Strand 8
A
310 315parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 87anti-parallel
Strand 3
B
51 55parallel
Strand 4
B
162 166parallel
Strand 5
B
20 24parallel
Strand 6
B
236 243parallel
Strand 7
B
265 274parallel
Strand 8
B
310 315parallel
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