Analysis of interatomic Contacts of Structural Units in PDB entry:
3SJC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SJC entry

There are 7 chains in PDB entry 3SJC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4ASP 352
B
 THR 4ASP 352
C
 LEU 38SER 91
D
 LEU 38SER 91
E
 THR 4ASP 352
F
 VAL 5ASP 352
G
 LEU 38ASP 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 3SJC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 14Right-handed alpha
Helix 2
2
A
30 46Right-handed alpha
Helix 3
3
A
60 67Right-handed alpha
Helix 4
4
A
89 94Right-handed alpha
Helix 5
5
A
135 155Right-handed alpha
Helix 6
6
A
173 177Right-handed 310
Helix 7
7
A
178 184Right-handed alpha
Helix 8
8
A
216 232Right-handed alpha
Helix 9
9
A
245 262Right-handed alpha
Helix 10
10
A
287 304Right-handed alpha
Helix 11
11
A
323 332Right-handed alpha
Helix 12
12
A
333 335Right-handed 310
Helix 13
13
A
344 350Right-handed alpha
Helix 14
14
B
9 14Right-handed alpha
Helix 15
15
B
30 44Right-handed alpha
Helix 16
16
B
60 67Right-handed alpha
Helix 17
17
B
135 155Right-handed alpha
Helix 18
18
B
172 177Right-handed 310
Helix 19
19
B
178 183Right-handed alpha
Helix 20
20
B
213 232Right-handed alpha
Helix 21
21
B
245 262Right-handed alpha
Helix 22
22
B
287 304Right-handed alpha
Helix 23
23
B
323 332Right-handed alpha
Helix 24
24
B
333 335Right-handed 310
Helix 25
25
B
339 351Right-handed alpha
Helix 26
26
C
38 58Right-handed alpha
Helix 27
27
C
64 90Right-handed alpha
Helix 28
28
D
38 58Right-handed alpha
Helix 29
29
D
64 90Right-handed alpha
Helix 30
30
E
9 14Right-handed alpha
Helix 31
31
E
30 44Right-handed alpha
Helix 32
32
E
60 67Right-handed alpha
Helix 33
33
E
89 94Right-handed alpha
Helix 34
34
E
135 155Right-handed alpha
Helix 35
35
E
172 177Right-handed 310
Helix 36
36
E
178 183Right-handed alpha
Helix 37
37
E
214 231Right-handed alpha
Helix 38
38
E
245 262Right-handed alpha
Helix 39
39
E
287 304Right-handed alpha
Helix 40
40
E
323 332Right-handed alpha
Helix 41
41
E
333 335Right-handed 310
Helix 42
42
E
339 351Right-handed alpha
Helix 43
43
F
9 14Right-handed alpha
Helix 44
44
F
30 44Right-handed alpha
Helix 45
45
F
60 67Right-handed alpha
Helix 46
46
F
89 94Right-handed alpha
Helix 47
47
F
135 155Right-handed alpha
Helix 48
48
F
172 179Right-handed 310
Helix 49
49
F
213 232Right-handed alpha
Helix 50
50
F
245 262Right-handed alpha
Helix 51
51
F
287 304Right-handed alpha
Helix 52
52
F
323 332Right-handed alpha
Helix 53
53
F
333 335Right-handed 310
Helix 54
54
F
339 351Right-handed alpha
Helix 55
55
G
38 58Right-handed alpha
Helix 56
56
G
64 90Right-handed alpha
Helix 57
57
H
38 58Right-handed alpha
Helix 58
58
H
64 90Right-handed alpha
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There are 4 sheets in PDB entry 3SJC. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
83 87anti-parallel
Strand 3
A
51 55parallel
Strand 4
A
162 166parallel
Strand 5
A
20 24parallel
Strand 6
A
236 243parallel
Strand 7
A
265 274parallel
Strand 8
A
310 315parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
75 76first strand
Strand 2
B
83 87anti-parallel
Strand 3
B
51 55parallel
Strand 4
B
162 166parallel
Strand 5
B
20 24parallel
Strand 6
B
236 243parallel
Strand 7
B
265 274parallel
Strand 8
B
310 315parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
75 76first strand
Strand 2
E
83 87anti-parallel
Strand 3
E
51 55parallel
Strand 4
E
162 166parallel
Strand 5
E
20 24parallel
Strand 6
E
236 243parallel
Strand 7
E
268 274parallel
Strand 8
E
310 315parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
75 76first strand
Strand 2
F
83 87anti-parallel
Strand 3
F
51 55parallel
Strand 4
F
162 166parallel
Strand 5
F
20 24parallel
Strand 6
F
236 243parallel
Strand 7
F
268 274parallel
Strand 8
F
310 315parallel
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