Analysis of interatomic Contacts of Structural Units in PDB entry:
3SJU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SJU entry

There are 2 chains in PDB entry 3SJU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 5TYR 259
B
 GLN 5TYR 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3SJU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
37 50Right-handed alpha
Helix 3
3
A
64 80Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
101 113Right-handed alpha
Helix 6
6
A
113 127Right-handed alpha
Helix 7
7
A
128 133Right-handed alpha
Helix 8
8
A
142 146Right-handed 310
Helix 9
9
A
152 173Right-handed alpha
Helix 10
10
A
174 176Right-handed 310
Helix 11
11
A
190 199Right-handed alpha
Helix 12
12
A
207 217Right-handed alpha
Helix 13
13
A
226 238Right-handed alpha
Helix 14
14
A
240 245Right-handed 310
Helix 15
15
B
15 27Right-handed alpha
Helix 16
16
B
37 51Right-handed alpha
Helix 17
17
B
64 80Right-handed alpha
Helix 18
18
B
96 100Right-handed 310
Helix 19
19
B
101 113Right-handed alpha
Helix 20
20
B
113 127Right-handed alpha
Helix 21
21
B
128 133Right-handed alpha
Helix 22
22
B
142 146Right-handed 310
Helix 23
23
B
152 174Right-handed alpha
Helix 24
24
B
190 199Right-handed alpha
Helix 25
25
B
209 217Right-handed alpha
Helix 26
26
B
226 238Right-handed alpha
Helix 27
27
B
239 243Right-handed 310
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There are 2 sheets in PDB entry 3SJU. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 59first strand
Strand 2
A
30 35parallel
Strand 3
A
6 10parallel
Strand 4
A
84 87parallel
Strand 5
A
135 140parallel
Strand 6
A
178 185parallel
Strand 7
A
249 252parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 59first strand
Strand 2
B
30 35parallel
Strand 3
B
6 10parallel
Strand 4
B
82 87parallel
Strand 5
B
135 140parallel
Strand 6
B
178 185parallel
Strand 7
B
248 252parallel
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