Analysis of interatomic Contacts of Structural Units in PDB entry:
3SKQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SKQ entry

There is 1 chain in PDB entry 3SKQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 182ASN 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3SKQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
182 199Right-handed alpha
Helix 2
2
A
205 209Right-handed 310
Helix 3
3
A
211 227Right-handed alpha
Helix 4
4
A
238 246Right-handed alpha
Helix 5
5
A
249 257Right-handed alpha
Helix 6
6
A
258 269Right-handed alpha
Helix 7
7
A
276 302Right-handed alpha
Helix 8
8
A
303 306Right-handed 310
Helix 9
9
A
307 318Right-handed alpha
Helix 10
10
A
326 343Right-handed alpha
Helix 11
11
A
347 356Right-handed alpha
Helix 12
12
A
357 359Right-handed 310
Helix 13
13
A
372 377Right-handed alpha
Helix 14
14
A
382 402Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3SKQ.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 237first strand
Strand 2
A
368 371parallel
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