Analysis of interatomic Contacts of Structural Units in PDB entry:
3SL7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SL7 entry

There are 2 chains in PDB entry 3SL7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 75ALA 234
B
 THR 75ALA 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 3SL7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
78 83Right-handed alpha
Helix 2
2
A
87 89Right-handed 310
Helix 3
3
A
97 109Right-handed alpha
Helix 4
4
A
128 132Right-handed alpha
Helix 5
5
A
157 167Right-handed alpha
Helix 6
6
A
172 177Right-handed alpha
Helix 7
7
A
189 198Right-handed alpha
Helix 8
8
A
220 233Right-handed alpha
Helix 9
9
B
78 83Right-handed alpha
Helix 10
10
B
87 89Right-handed 310
Helix 11
11
B
97 109Right-handed alpha
Helix 12
12
B
128 132Right-handed alpha
Helix 13
13
B
157 167Right-handed alpha
Helix 14
14
B
172 177Right-handed alpha
Helix 15
15
B
189 198Right-handed alpha
Helix 16
16
B
220 232Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3SL7. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 85first strand
Strand 2
A
214 219anti-parallel
Strand 3
A
204 208anti-parallel
Strand 4
A
184 185parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 116first strand
Strand 2
A
122 127anti-parallel
Strand 3
A
178 179anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 85first strand
Strand 2
B
214 219anti-parallel
Strand 3
B
204 208anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 116first strand
Strand 2
B
122 127anti-parallel
Strand 3
B
178 179anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il