Analysis of interatomic Contacts of Structural Units in PDB entry:
3SWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SWX entry

There are 3 chains in PDB entry 3SWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3ARG 261
B
 ASP 3ARG 261
C
 ASP 3ARG 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 3SWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 26Right-handed 310
Helix 2
2
A
30 47Right-handed alpha
Helix 3
3
A
67 76Right-handed alpha
Helix 4
4
A
111 120Right-handed alpha
Helix 5
5
A
134 139Right-handed 310
Helix 6
6
A
145 155Right-handed alpha
Helix 7
7
A
155 164Right-handed alpha
Helix 8
8
A
171 177Right-handed alpha
Helix 9
9
A
188 203Right-handed alpha
Helix 10
10
A
204 222Right-handed alpha
Helix 11
11
A
222 239Right-handed alpha
Helix 12
12
A
240 252Right-handed alpha
Helix 13
13
B
22 26Right-handed 310
Helix 14
14
B
30 47Right-handed alpha
Helix 15
15
B
68 70Right-handed 310
Helix 16
16
B
71 78Right-handed alpha
Helix 17
17
B
111 120Right-handed alpha
Helix 18
18
B
134 139Right-handed 310
Helix 19
19
B
145 155Right-handed alpha
Helix 20
20
B
155 164Right-handed alpha
Helix 21
21
B
171 177Right-handed alpha
Helix 22
22
B
188 202Right-handed alpha
Helix 23
23
B
204 222Right-handed alpha
Helix 24
24
B
222 239Right-handed alpha
Helix 25
25
B
240 252Right-handed alpha
Helix 26
26
C
22 26Right-handed 310
Helix 27
27
C
30 47Right-handed alpha
Helix 28
28
C
67 77Right-handed alpha
Helix 29
29
C
111 120Right-handed alpha
Helix 30
30
C
134 139Right-handed 310
Helix 31
31
C
145 155Right-handed alpha
Helix 32
32
C
155 164Right-handed alpha
Helix 33
33
C
171 177Right-handed alpha
Helix 34
34
C
188 202Right-handed alpha
Helix 35
35
C
204 222Right-handed alpha
Helix 36
36
C
222 239Right-handed alpha
Helix 37
37
C
240 253Right-handed alpha
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There are 6 sheets in PDB entry 3SWX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
15 20anti-parallel
Strand 3
A
52 57parallel
Strand 4
A
101 105parallel
Strand 5
A
122 126parallel
Strand 6
A
182 184parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 110first strand
Strand 2
A
130 132parallel
Strand 3
A
168 170anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 12first strand
Strand 2
B
15 20anti-parallel
Strand 3
B
52 57parallel
Strand 4
B
101 105parallel
Strand 5
B
122 126parallel
Strand 6
B
182 184parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 110first strand
Strand 2
B
130 132parallel
Strand 3
B
169 170anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 12first strand
Strand 2
C
15 20anti-parallel
Strand 3
C
52 57parallel
Strand 4
C
101 105parallel
Strand 5
C
122 126parallel
Strand 6
C
182 184parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
108 110first strand
Strand 2
C
130 132parallel
Strand 3
C
168 170anti-parallel
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