Analysis of interatomic Contacts of Structural Units in PDB entry:
3SZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3SZ8 entry

There are 4 chains in PDB entry 3SZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LEU 278
B
 SER 0GLU 279
C
 MET 1GLU 279
D
 SER 0GLU 279
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 3SZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 47Right-handed alpha
Helix 2
2
A
71 87Right-handed alpha
Helix 3
3
A
96 98Right-handed 310
Helix 4
4
A
99 105Right-handed alpha
Helix 5
5
A
113 117Right-handed 310
Helix 6
6
A
119 129Right-handed alpha
Helix 7
7
A
142 145Right-handed 310
Helix 8
8
A
146 156Right-handed alpha
Helix 9
9
A
180 189Right-handed alpha
Helix 10
10
A
218 230Right-handed alpha
Helix 11
11
A
241 245Right-handed 310
Helix 12
12
A
257 273Right-handed alpha
Helix 13
13
B
28 47Right-handed alpha
Helix 14
14
B
71 87Right-handed alpha
Helix 15
15
B
96 98Right-handed 310
Helix 16
16
B
99 107Right-handed alpha
Helix 17
17
B
113 117Right-handed 310
Helix 18
18
B
119 129Right-handed alpha
Helix 19
19
B
142 145Right-handed 310
Helix 20
20
B
146 156Right-handed alpha
Helix 21
21
B
180 188Right-handed alpha
Helix 22
22
B
218 230Right-handed alpha
Helix 23
23
B
257 273Right-handed alpha
Helix 24
24
C
28 47Right-handed alpha
Helix 25
25
C
71 87Right-handed alpha
Helix 26
26
C
96 98Right-handed 310
Helix 27
27
C
99 105Right-handed alpha
Helix 28
28
C
113 117Right-handed 310
Helix 29
29
C
119 129Right-handed alpha
Helix 30
30
C
142 144Right-handed 310
Helix 31
31
C
145 156Right-handed alpha
Helix 32
32
C
180 189Right-handed alpha
Helix 33
33
C
218 230Right-handed alpha
Helix 34
34
C
241 245Right-handed 310
Helix 35
35
C
257 273Right-handed alpha
Helix 36
36
D
28 47Right-handed alpha
Helix 37
37
D
70 87Right-handed alpha
Helix 38
38
D
96 98Right-handed 310
Helix 39
39
D
99 107Right-handed alpha
Helix 40
40
D
113 117Right-handed 310
Helix 41
41
D
119 129Right-handed alpha
Helix 42
42
D
146 156Right-handed alpha
Helix 43
43
D
180 188Right-handed alpha
Helix 44
44
D
218 230Right-handed alpha
Helix 45
45
D
257 273Right-handed alpha
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There are 12 sheets in PDB entry 3SZ8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 6first strand
Strand 2
A
9 12anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
233 239parallel
Strand 3
A
194 197parallel
Strand 4
A
161 165parallel
Strand 5
A
133 136parallel
Strand 6
A
109 112parallel
Strand 7
A
90 93parallel
Strand 8
A
50 55parallel
Strand 9
A
18 25parallel
Strand 10
A
233 239parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 169first strand
Strand 2
A
175 176anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 6first strand
Strand 2
B
9 11anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
253 254first strand
Strand 2
B
233 239parallel
Strand 3
B
194 197parallel
Strand 4
B
161 165parallel
Strand 5
B
133 136parallel
Strand 6
B
109 112parallel
Strand 7
B
90 93parallel
Strand 8
B
50 55parallel
Strand 9
B
18 25parallel
Strand 10
B
233 239parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
168 169first strand
Strand 2
B
175 176anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3 6first strand
Strand 2
C
9 11anti-parallel
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There are 10 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
253 254first strand
Strand 2
C
233 239parallel
Strand 3
C
194 197parallel
Strand 4
C
161 165parallel
Strand 5
C
133 136parallel
Strand 6
C
109 112parallel
Strand 7
C
90 93parallel
Strand 8
C
50 55parallel
Strand 9
C
18 25parallel
Strand 10
C
233 239parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
168 169first strand
Strand 2
C
175 176anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
D
9 11anti-parallel
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There are 10 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
253 254first strand
Strand 2
D
233 239parallel
Strand 3
D
194 197parallel
Strand 4
D
161 165parallel
Strand 5
D
133 136parallel
Strand 6
D
109 112parallel
Strand 7
D
90 93parallel
Strand 8
D
50 55parallel
Strand 9
D
18 25parallel
Strand 10
D
233 239parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
168 169first strand
Strand 2
D
175 176anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il