Analysis of interatomic Contacts of Structural Units in PDB entry:
3T15


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T15 entry

There is 1 chain in PDB entry 3T15 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 68LYS 360
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3T15. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 93Right-handed alpha
Helix 2
2
A
115 127Right-handed alpha
Helix 3
3
A
136 141Right-handed alpha
Helix 4
4
A
145 163Right-handed alpha
Helix 5
5
A
191 205Right-handed alpha
Helix 6
6
A
237 244Right-handed alpha
Helix 7
7
A
253 266Right-handed alpha
Helix 8
8
A
267 269Right-handed 310
Helix 9
9
A
271 282Right-handed alpha
Helix 10
10
A
286 309Right-handed alpha
Helix 11
11
A
314 319Right-handed alpha
Helix 12
12
A
334 360Right-handed alpha
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There are 2 sheets in PDB entry 3T15. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
76 77anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
170 173parallel
Strand 3
A
225 228parallel
Strand 4
A
105 110parallel
Strand 5
A
245 250parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il