Analysis of interatomic Contacts of Structural Units in PDB entry:
3T22


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T22 entry

There are 4 chains in PDB entry 3T22 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 91ALA 308
B
 GLY 91LEU 307
C
 GLY 91ALA 308
D
 LEU 93LEU 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 3T22. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
101 117Right-handed alpha
Helix 2
2
A
128 138Right-handed alpha
Helix 3
3
A
173 178Right-handed 310
Helix 4
4
A
182 186Right-handed 310
Helix 5
5
A
187 189Right-handed 310
Helix 6
6
A
198 209Right-handed alpha
Helix 7
7
A
224 234Right-handed alpha
Helix 8
8
A
244 249Right-handed 310
Helix 9
9
A
250 255Right-handed alpha
Helix 10
10
A
279 293Right-handed alpha
Helix 11
11
A
294 300Right-handed 310
Helix 12
12
B
101 117Right-handed alpha
Helix 13
13
B
128 138Right-handed alpha
Helix 14
14
B
173 178Right-handed 310
Helix 15
15
B
182 186Right-handed 310
Helix 16
16
B
187 189Right-handed 310
Helix 17
17
B
198 208Right-handed alpha
Helix 18
18
B
224 234Right-handed alpha
Helix 19
19
B
244 249Right-handed 310
Helix 20
20
B
250 255Right-handed alpha
Helix 21
21
B
279 293Right-handed alpha
Helix 22
22
B
294 300Right-handed 310
Helix 23
23
C
101 117Right-handed alpha
Helix 24
24
C
128 139Right-handed alpha
Helix 25
25
C
173 178Right-handed 310
Helix 26
26
C
182 186Right-handed 310
Helix 27
27
C
187 191Right-handed 310
Helix 28
28
C
198 209Right-handed alpha
Helix 29
29
C
224 234Right-handed alpha
Helix 30
30
C
244 249Right-handed 310
Helix 31
31
C
250 255Right-handed alpha
Helix 32
32
C
279 293Right-handed alpha
Helix 33
33
C
295 300Right-handed 310
Helix 34
34
D
101 117Right-handed alpha
Helix 35
35
D
128 138Right-handed alpha
Helix 36
36
D
173 178Right-handed 310
Helix 37
37
D
182 186Right-handed 310
Helix 38
38
D
198 208Right-handed alpha
Helix 39
39
D
224 234Right-handed alpha
Helix 40
40
D
244 249Right-handed 310
Helix 41
41
D
250 255Right-handed alpha
Helix 42
42
D
279 294Right-handed alpha
Helix 43
43
D
295 299Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 3T22. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
238 242parallel
Strand 3
A
155 169anti-parallel
Strand 4
A
264 274anti-parallel
Strand 5
A
305 307parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
155 169anti-parallel
Strand 3
A
264 274anti-parallel
Strand 4
A
143 146anti-parallel
Strand 5
A
93 97parallel
Strand 6
A
122 126parallel
Strand 7
B
220 221parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
B
121 126parallel
Strand 3
B
92 97parallel
Strand 4
B
143 146parallel
Strand 5
B
264 274anti-parallel
Strand 6
B
155 169anti-parallel
Strand 7
B
257 259anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 192first strand
Strand 2
B
238 242parallel
Strand 3
B
155 169anti-parallel
Strand 4
B
264 274anti-parallel
Strand 5
B
305 306parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
238 242first strand
Strand 2
C
155 169anti-parallel
Strand 3
C
264 274anti-parallel
Strand 4
C
305 307parallel
Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
257 259first strand
Strand 2
C
155 169anti-parallel
Strand 3
C
264 274anti-parallel
Strand 4
C
143 146anti-parallel
Strand 5
C
93 97parallel
Strand 6
C
122 126parallel
Strand 7
D
220 221parallel
Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
220 221first strand
Strand 2
D
123 126parallel
Strand 3
D
94 97parallel
Strand 4
D
143 146parallel
Strand 5
D
264 274anti-parallel
Strand 6
D
155 169anti-parallel
Strand 7
D
257 259anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
191 192first strand
Strand 2
D
238 242parallel
Strand 3
D
155 169anti-parallel
Strand 4
D
264 274anti-parallel
Strand 5
D
305 306parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il