Analysis of interatomic Contacts of Structural Units in PDB entry:
3T2K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T2K entry

There is 1 chain in PDB entry 3T2K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET -2MET 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3T2K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
26 28Right-handed 310
Helix 3
3
A
44 50Right-handed alpha
Helix 4
4
A
54 58Right-handed alpha
Helix 5
5
A
62 68Right-handed alpha
Helix 6
6
A
111 114Right-handed 310
Helix 7
7
A
129 146Right-handed alpha
Helix 8
8
A
161 178Right-handed alpha
Helix 9
9
A
180 184Right-handed 310
Helix 10
10
A
206 218Right-handed alpha
Helix 11
11
A
267 272Right-handed alpha
Helix 12
12
A
301 304Right-handed 310
Helix 13
13
A
321 342Right-handed alpha
Helix 14
14
A
385 405Right-handed alpha
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There are 7 sheets in PDB entry 3T2K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 75first strand
Strand 2
A
29 34parallel
Strand 3
A
3 7parallel
Strand 4
A
100 103parallel
Strand 5
A
297 299parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
59 61anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
87 90anti-parallel
Strand 3
A
95 97anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 109first strand
Strand 2
A
264 266anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
257 261parallel
Strand 3
A
150 154parallel
Strand 4
A
187 190parallel
Strand 5
A
221 223parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 232first strand
Strand 2
A
235 241anti-parallel
Strand 3
A
247 254anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 359first strand
Strand 2
A
364 370anti-parallel
Strand 3
A
378 384anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il