Analysis of interatomic Contacts of Structural Units in PDB entry:
3T35


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T35 entry

There are 4 chains in PDB entry 3T35 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3VAL 606
B
 ASN 3VAL 606
C
 ASN 3VAL 606
D
 ASN 3VAL 606
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 3T35. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 11Right-handed alpha
Helix 2
2
A
46 51Right-handed alpha
Helix 3
3
A
99 111Right-handed alpha
Helix 4
4
A
112 114Right-handed 310
Helix 5
5
A
157 170Right-handed alpha
Helix 6
6
A
190 197Right-handed alpha
Helix 7
7
A
244 249Right-handed alpha
Helix 8
8
A
254 267Right-handed alpha
Helix 9
9
A
268 272Right-handed 310
Helix 10
10
A
274 278Right-handed 310
Helix 11
11
A
279 297Right-handed alpha
Helix 12
12
A
588 605Right-handed alpha
Helix 13
13
B
4 13Right-handed alpha
Helix 14
14
B
14 18Right-handed 310
Helix 15
15
B
46 53Right-handed alpha
Helix 16
16
B
99 111Right-handed alpha
Helix 17
17
B
112 115Right-handed 310
Helix 18
18
B
162 172Right-handed alpha
Helix 19
19
B
186 189Right-handed 310
Helix 20
20
B
190 200Right-handed alpha
Helix 21
21
B
222 227Right-handed alpha
Helix 22
22
B
244 250Right-handed alpha
Helix 23
23
B
255 267Right-handed alpha
Helix 24
24
B
271 275Right-handed 310
Helix 25
25
B
280 299Right-handed alpha
Helix 26
26
B
307 314Right-handed alpha
Helix 27
27
B
585 594Right-handed alpha
Helix 28
28
B
596 605Right-handed alpha
Helix 29
29
C
4 16Right-handed alpha
Helix 30
30
C
46 51Right-handed alpha
Helix 31
31
C
100 111Right-handed alpha
Helix 32
32
C
156 172Right-handed alpha
Helix 33
33
C
186 189Right-handed 310
Helix 34
34
C
190 197Right-handed alpha
Helix 35
35
C
222 226Right-handed 310
Helix 36
36
C
246 250Right-handed 310
Helix 37
37
C
254 268Right-handed alpha
Helix 38
38
C
268 273Right-handed alpha
Helix 39
39
C
279 289Right-handed alpha
Helix 40
40
C
289 299Right-handed alpha
Helix 41
41
C
300 302Right-handed 310
Helix 42
42
C
309 314Right-handed alpha
Helix 43
43
C
583 588Right-handed 310
Helix 44
44
C
592 600Right-handed alpha
Helix 45
45
D
4 14Right-handed alpha
Helix 46
46
D
26 31Right-handed alpha
Helix 47
47
D
46 55Right-handed alpha
Helix 48
48
D
99 112Right-handed alpha
Helix 49
49
D
160 166Right-handed alpha
Helix 50
50
D
190 195Right-handed alpha
Helix 51
51
D
212 216Right-handed 310
Helix 52
52
D
222 227Right-handed alpha
Helix 53
53
D
255 268Right-handed alpha
Helix 54
54
D
271 275Right-handed 310
Helix 55
55
D
280 298Right-handed alpha
Helix 56
56
D
302 311Right-handed alpha
Helix 57
57
D
584 600Right-handed alpha
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There are 7 sheets in PDB entry 3T35. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 129first strand
Strand 2
A
73 75parallel
Strand 3
A
139 142anti-parallel
Strand 4
A
37 40parallel
Strand 5
A
177 179parallel
Strand 6
A
207 208parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 88first strand
Strand 2
B
129 132anti-parallel
Strand 3
B
73 78parallel
Strand 4
B
138 141anti-parallel
Strand 5
B
37 39parallel
Strand 6
B
176 180parallel
Strand 7
B
206 210parallel
Strand 8
B
237 239parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 127first strand
Strand 2
C
72 73parallel
Strand 3
C
140 142anti-parallel
Strand 4
C
37 40parallel
Strand 5
C
176 182parallel
Strand 6
C
206 211parallel
Strand 7
C
238 239parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
76 77first strand
Strand 2
C
130 131parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
87 88first strand
Strand 2
C
96 97anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 42first strand
Strand 2
D
138 146parallel
Strand 3
D
72 76anti-parallel
Strand 4
D
126 130parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
180 182first strand
Strand 2
D
209 211parallel
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