Analysis of interatomic Contacts of Structural Units in PDB entry:
3T3W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T3W entry

There are 6 chains in PDB entry 3T3W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 16VAL 264
B
 GLU 16SER 260
C
 GLU 16LEU 265
D
 GLU 16VAL 266
E
 GLU 16LEU 265
F
 ARG 14ARG 81
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 78 helices in PDB entry 3T3W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 38Right-handed 310
Helix 2
2
A
42 59Right-handed alpha
Helix 3
3
A
91 103Right-handed alpha
Helix 4
4
A
103 113Right-handed alpha
Helix 5
5
A
129 134Right-handed alpha
Helix 6
6
A
150 155Right-handed 310
Helix 7
7
A
163 169Right-handed alpha
Helix 8
8
A
169 180Right-handed alpha
Helix 9
9
A
185 191Right-handed alpha
Helix 10
10
A
199 201Right-handed 310
Helix 11
11
A
202 216Right-handed alpha
Helix 12
12
A
218 236Right-handed alpha
Helix 13
13
A
237 260Right-handed alpha
Helix 14
14
B
34 38Right-handed 310
Helix 15
15
B
42 59Right-handed alpha
Helix 16
16
B
91 103Right-handed alpha
Helix 17
17
B
103 113Right-handed alpha
Helix 18
18
B
129 134Right-handed alpha
Helix 19
19
B
150 155Right-handed 310
Helix 20
20
B
163 169Right-handed alpha
Helix 21
21
B
169 180Right-handed alpha
Helix 22
22
B
185 191Right-handed alpha
Helix 23
23
B
199 201Right-handed 310
Helix 24
24
B
202 216Right-handed alpha
Helix 25
25
B
218 237Right-handed alpha
Helix 26
26
B
237 260Right-handed alpha
Helix 27
27
C
34 38Right-handed 310
Helix 28
28
C
42 59Right-handed alpha
Helix 29
29
C
91 103Right-handed alpha
Helix 30
30
C
103 113Right-handed alpha
Helix 31
31
C
129 134Right-handed alpha
Helix 32
32
C
150 155Right-handed 310
Helix 33
33
C
163 169Right-handed alpha
Helix 34
34
C
169 180Right-handed alpha
Helix 35
35
C
185 191Right-handed alpha
Helix 36
36
C
199 201Right-handed 310
Helix 37
37
C
202 216Right-handed alpha
Helix 38
38
C
218 237Right-handed alpha
Helix 39
39
C
237 261Right-handed alpha
Helix 40
40
D
34 38Right-handed 310
Helix 41
41
D
42 59Right-handed alpha
Helix 42
42
D
91 103Right-handed alpha
Helix 43
43
D
103 113Right-handed alpha
Helix 44
44
D
129 134Right-handed alpha
Helix 45
45
D
150 155Right-handed 310
Helix 46
46
D
163 169Right-handed alpha
Helix 47
47
D
169 180Right-handed alpha
Helix 48
48
D
185 191Right-handed alpha
Helix 49
49
D
199 201Right-handed 310
Helix 50
50
D
202 215Right-handed alpha
Helix 51
51
D
218 237Right-handed alpha
Helix 52
52
D
237 261Right-handed alpha
Helix 53
53
E
34 38Right-handed 310
Helix 54
54
E
42 59Right-handed alpha
Helix 55
55
E
91 103Right-handed alpha
Helix 56
56
E
103 112Right-handed alpha
Helix 57
57
E
129 134Right-handed alpha
Helix 58
58
E
150 155Right-handed 310
Helix 59
59
E
163 169Right-handed alpha
Helix 60
60
E
169 180Right-handed alpha
Helix 61
61
E
185 191Right-handed alpha
Helix 62
62
E
199 201Right-handed 310
Helix 63
63
E
202 216Right-handed alpha
Helix 64
64
E
218 237Right-handed alpha
Helix 65
65
E
237 261Right-handed alpha
Helix 66
66
F
34 38Right-handed 310
Helix 67
67
F
42 59Right-handed alpha
Helix 68
68
F
91 103Right-handed alpha
Helix 69
69
F
103 113Right-handed alpha
Helix 70
70
F
129 134Right-handed alpha
Helix 71
71
F
150 155Right-handed 310
Helix 72
72
F
163 169Right-handed alpha
Helix 73
73
F
169 180Right-handed alpha
Helix 74
74
F
185 191Right-handed alpha
Helix 75
75
F
199 201Right-handed 310
Helix 76
76
F
202 215Right-handed alpha
Helix 77
77
F
218 237Right-handed alpha
Helix 78
78
F
237 261Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 3T3W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 24first strand
Strand 2
A
27 32anti-parallel
Strand 3
A
64 69parallel
Strand 4
A
117 121parallel
Strand 5
A
138 142parallel
Strand 6
A
196 198parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 126first strand
Strand 2
A
146 148parallel
Strand 3
A
183 184anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 24first strand
Strand 2
B
27 32anti-parallel
Strand 3
B
64 69parallel
Strand 4
B
117 121parallel
Strand 5
B
138 142parallel
Strand 6
B
196 198parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
124 126first strand
Strand 2
B
146 148parallel
Strand 3
B
183 184anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
19 24first strand
Strand 2
C
27 32anti-parallel
Strand 3
C
64 69parallel
Strand 4
C
117 121parallel
Strand 5
C
138 142parallel
Strand 6
C
196 198parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 126first strand
Strand 2
C
146 148parallel
Strand 3
C
183 184anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
19 24first strand
Strand 2
D
27 32anti-parallel
Strand 3
D
64 69parallel
Strand 4
D
117 121parallel
Strand 5
D
138 142parallel
Strand 6
D
196 198parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
124 126first strand
Strand 2
D
146 148parallel
Strand 3
D
183 184anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
19 24first strand
Strand 2
E
27 32anti-parallel
Strand 3
E
64 69parallel
Strand 4
E
117 121parallel
Strand 5
E
138 142parallel
Strand 6
E
196 198parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
124 126first strand
Strand 2
E
146 148parallel
Strand 3
E
183 184anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
19 24first strand
Strand 2
F
27 32anti-parallel
Strand 3
F
64 69parallel
Strand 4
F
117 121parallel
Strand 5
F
138 142parallel
Strand 6
F
196 198parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
124 126first strand
Strand 2
F
146 148parallel
Strand 3
F
183 184anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il