Analysis of interatomic Contacts of Structural Units in PDB entry:
3T58


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T58 entry

There are 4 chains in PDB entry 3T58 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 36ASP 547
B
 SER 36SER 548
C
 SER 36SER 548
D
 VAL 37ASP 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are103 helices in PDB entry 3T58. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 58Right-handed alpha
Helix 2
2
A
73 91Right-handed alpha
Helix 3
3
A
92 94Right-handed 310
Helix 4
4
A
106 108Right-handed 310
Helix 5
5
A
109 116Right-handed alpha
Helix 6
6
A
145 158Right-handed alpha
Helix 7
7
A
175 180Right-handed alpha
Helix 8
8
A
181 185Right-handed 310
Helix 9
9
A
201 210Right-handed alpha
Helix 10
10
A
225 233Right-handed alpha
Helix 11
11
A
258 267Right-handed alpha
Helix 12
12
A
292 297Right-handed alpha
Helix 13
13
A
304 317Right-handed alpha
Helix 14
14
A
318 322Right-handed 310
Helix 15
15
A
327 344Right-handed alpha
Helix 16
16
A
347 364Right-handed alpha
Helix 17
17
A
371 381Right-handed alpha
Helix 18
18
A
382 387Right-handed alpha
Helix 19
19
A
405 427Right-handed alpha
Helix 20
20
A
436 450Right-handed alpha
Helix 21
21
A
452 467Right-handed alpha
Helix 22
22
A
468 470Right-handed 310
Helix 23
23
A
472 492Right-handed alpha
Helix 24
24
A
527 539Right-handed alpha
Helix 25
25
A
540 542Right-handed 310
Helix 26
26
B
52 58Right-handed alpha
Helix 27
27
B
73 90Right-handed alpha
Helix 28
28
B
91 94Right-handed 310
Helix 29
29
B
106 108Right-handed 310
Helix 30
30
B
109 116Right-handed alpha
Helix 31
31
B
145 158Right-handed alpha
Helix 32
32
B
175 180Right-handed alpha
Helix 33
33
B
181 185Right-handed 310
Helix 34
34
B
201 210Right-handed alpha
Helix 35
35
B
225 233Right-handed alpha
Helix 36
36
B
258 267Right-handed alpha
Helix 37
37
B
292 296Right-handed 310
Helix 38
38
B
304 317Right-handed alpha
Helix 39
39
B
318 322Right-handed 310
Helix 40
40
B
327 344Right-handed alpha
Helix 41
41
B
347 364Right-handed alpha
Helix 42
42
B
371 381Right-handed alpha
Helix 43
43
B
382 387Right-handed alpha
Helix 44
44
B
405 428Right-handed alpha
Helix 45
45
B
436 449Right-handed alpha
Helix 46
46
B
452 467Right-handed alpha
Helix 47
47
B
468 470Right-handed 310
Helix 48
48
B
472 492Right-handed alpha
Helix 49
49
B
512 516Right-handed 310
Helix 50
50
B
527 539Right-handed alpha
Helix 51
51
B
540 542Right-handed 310
Helix 52
52
C
52 58Right-handed alpha
Helix 53
53
C
73 89Right-handed alpha
Helix 54
54
C
90 94Right-handed 310
Helix 55
55
C
106 108Right-handed 310
Helix 56
56
C
109 116Right-handed alpha
Helix 57
57
C
145 158Right-handed alpha
Helix 58
58
C
175 180Right-handed alpha
Helix 59
59
C
181 185Right-handed 310
Helix 60
60
C
201 210Right-handed alpha
Helix 61
61
C
225 233Right-handed alpha
Helix 62
62
C
258 267Right-handed alpha
Helix 63
63
C
292 296Right-handed 310
Helix 64
64
C
304 317Right-handed alpha
Helix 65
65
C
318 322Right-handed 310
Helix 66
66
C
327 344Right-handed alpha
Helix 67
67
C
347 364Right-handed alpha
Helix 68
68
C
371 381Right-handed alpha
Helix 69
69
C
382 387Right-handed alpha
Helix 70
70
C
405 428Right-handed alpha
Helix 71
71
C
436 449Right-handed alpha
Helix 72
72
C
452 467Right-handed alpha
Helix 73
73
C
468 470Right-handed 310
Helix 74
74
C
472 492Right-handed alpha
Helix 75
75
C
512 516Right-handed 310
Helix 76
76
C
527 539Right-handed alpha
Helix 77
77
C
540 542Right-handed 310
Helix 78
78
D
52 58Right-handed alpha
Helix 79
79
D
73 89Right-handed alpha
Helix 80
80
D
90 94Right-handed 310
Helix 81
81
D
106 110Right-handed 310
Helix 82
82
D
111 116Right-handed alpha
Helix 83
83
D
145 158Right-handed alpha
Helix 84
84
D
175 180Right-handed alpha
Helix 85
85
D
181 185Right-handed 310
Helix 86
86
D
201 210Right-handed alpha
Helix 87
87
D
225 233Right-handed alpha
Helix 88
88
D
258 267Right-handed alpha
Helix 89
89
D
292 296Right-handed 310
Helix 90
90
D
304 317Right-handed alpha
Helix 91
91
D
318 322Right-handed 310
Helix 92
92
D
327 344Right-handed alpha
Helix 93
93
D
347 364Right-handed alpha
Helix 94
94
D
371 381Right-handed alpha
Helix 95
95
D
382 387Right-handed alpha
Helix 96
96
D
405 428Right-handed alpha
Helix 97
97
D
436 449Right-handed alpha
Helix 98
98
D
452 467Right-handed alpha
Helix 99
99
D
468 470Right-handed 310
Helix 100
100
D
472 492Right-handed alpha
Helix 101
101
D
512 516Right-handed 310
Helix 102
102
D
527 539Right-handed alpha
Helix 103
103
D
540 542Right-handed 310
Back to top of page

There are 16 sheets in PDB entry 3T58. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
97 103parallel
Strand 3
A
63 69parallel
Strand 4
A
123 127anti-parallel
Strand 5
A
137 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 222first strand
Strand 2
A
190 196parallel
Strand 3
A
239 244anti-parallel
Strand 4
A
249 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
544 545parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 326first strand
Strand 2
A
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
97 103parallel
Strand 3
B
63 69parallel
Strand 4
B
123 127anti-parallel
Strand 5
B
137 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 222first strand
Strand 2
B
190 196parallel
Strand 3
B
239 244anti-parallel
Strand 4
B
249 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 303first strand
Strand 2
B
544 545parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
C
97 103parallel
Strand 3
C
63 69parallel
Strand 4
C
123 127anti-parallel
Strand 5
C
137 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 222first strand
Strand 2
C
190 196parallel
Strand 3
C
239 243anti-parallel
Strand 4
C
249 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
302 303first strand
Strand 2
C
544 545parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 326first strand
Strand 2
C
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 47first strand
Strand 2
D
97 103parallel
Strand 3
D
63 69parallel
Strand 4
D
123 127anti-parallel
Strand 5
D
137 139anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
216 222first strand
Strand 2
D
190 196parallel
Strand 3
D
239 243anti-parallel
Strand 4
D
249 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
302 303first strand
Strand 2
D
544 545parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
324 326first strand
Strand 2
D
368 370anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il