Analysis of interatomic Contacts of Structural Units in PDB entry:
3T59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T59 entry

There are 4 chains in PDB entry 3T59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 36SER 548
B
 LEU 38SER 549
C
 VAL 37SER 548
D
 LEU 38ASP 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are102 helices in PDB entry 3T59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 58Right-handed alpha
Helix 2
2
A
73 90Right-handed alpha
Helix 3
3
A
91 94Right-handed 310
Helix 4
4
A
106 110Right-handed 310
Helix 5
5
A
111 116Right-handed alpha
Helix 6
6
A
145 159Right-handed alpha
Helix 7
7
A
175 180Right-handed alpha
Helix 8
8
A
201 210Right-handed alpha
Helix 9
9
A
225 232Right-handed alpha
Helix 10
10
A
258 268Right-handed alpha
Helix 11
11
A
292 296Right-handed 310
Helix 12
12
A
304 317Right-handed alpha
Helix 13
13
A
318 322Right-handed 310
Helix 14
14
A
326 344Right-handed alpha
Helix 15
15
A
347 364Right-handed alpha
Helix 16
16
A
371 380Right-handed alpha
Helix 17
17
A
382 387Right-handed alpha
Helix 18
18
A
405 428Right-handed alpha
Helix 19
19
A
436 450Right-handed alpha
Helix 20
20
A
452 467Right-handed alpha
Helix 21
21
A
472 492Right-handed alpha
Helix 22
22
A
508 513Right-handed alpha
Helix 23
23
A
514 516Right-handed 310
Helix 24
24
A
527 539Right-handed alpha
Helix 25
25
A
540 542Right-handed 310
Helix 26
26
B
52 58Right-handed alpha
Helix 27
27
B
73 90Right-handed alpha
Helix 28
28
B
91 94Right-handed 310
Helix 29
29
B
106 108Right-handed 310
Helix 30
30
B
109 116Right-handed alpha
Helix 31
31
B
145 159Right-handed alpha
Helix 32
32
B
175 180Right-handed alpha
Helix 33
33
B
181 185Right-handed 310
Helix 34
34
B
201 210Right-handed alpha
Helix 35
35
B
225 233Right-handed alpha
Helix 36
36
B
258 268Right-handed alpha
Helix 37
37
B
292 297Right-handed alpha
Helix 38
38
B
304 317Right-handed alpha
Helix 39
39
B
318 322Right-handed 310
Helix 40
40
B
327 344Right-handed alpha
Helix 41
41
B
347 364Right-handed alpha
Helix 42
42
B
371 381Right-handed alpha
Helix 43
43
B
382 387Right-handed alpha
Helix 44
44
B
405 427Right-handed alpha
Helix 45
45
B
436 450Right-handed alpha
Helix 46
46
B
452 467Right-handed alpha
Helix 47
47
B
468 470Right-handed 310
Helix 48
48
B
472 492Right-handed alpha
Helix 49
49
B
512 516Right-handed 310
Helix 50
50
B
527 539Right-handed alpha
Helix 51
51
B
540 542Right-handed 310
Helix 52
52
C
49 58Right-handed alpha
Helix 53
53
C
73 90Right-handed alpha
Helix 54
54
C
91 94Right-handed 310
Helix 55
55
C
111 116Right-handed alpha
Helix 56
56
C
145 158Right-handed alpha
Helix 57
57
C
175 180Right-handed alpha
Helix 58
58
C
181 186Right-handed 310
Helix 59
59
C
201 210Right-handed alpha
Helix 60
60
C
227 232Right-handed alpha
Helix 61
61
C
258 269Right-handed alpha
Helix 62
62
C
292 296Right-handed 310
Helix 63
63
C
304 317Right-handed alpha
Helix 64
64
C
318 322Right-handed 310
Helix 65
65
C
327 344Right-handed alpha
Helix 66
66
C
347 363Right-handed alpha
Helix 67
67
C
371 381Right-handed alpha
Helix 68
68
C
382 387Right-handed alpha
Helix 69
69
C
405 428Right-handed alpha
Helix 70
70
C
436 450Right-handed alpha
Helix 71
71
C
452 467Right-handed alpha
Helix 72
72
C
468 470Right-handed 310
Helix 73
73
C
472 492Right-handed alpha
Helix 74
74
C
508 516Right-handed 310
Helix 75
75
C
527 539Right-handed alpha
Helix 76
76
C
540 542Right-handed 310
Helix 77
77
D
52 58Right-handed alpha
Helix 78
78
D
73 89Right-handed alpha
Helix 79
79
D
90 94Right-handed 310
Helix 80
80
D
106 108Right-handed 310
Helix 81
81
D
109 116Right-handed alpha
Helix 82
82
D
145 158Right-handed alpha
Helix 83
83
D
175 180Right-handed alpha
Helix 84
84
D
181 185Right-handed 310
Helix 85
85
D
201 210Right-handed alpha
Helix 86
86
D
225 230Right-handed alpha
Helix 87
87
D
258 266Right-handed alpha
Helix 88
88
D
292 297Right-handed alpha
Helix 89
89
D
304 317Right-handed alpha
Helix 90
90
D
318 322Right-handed 310
Helix 91
91
D
327 344Right-handed alpha
Helix 92
92
D
347 364Right-handed alpha
Helix 93
93
D
371 380Right-handed alpha
Helix 94
94
D
382 387Right-handed alpha
Helix 95
95
D
405 428Right-handed alpha
Helix 96
96
D
436 450Right-handed alpha
Helix 97
97
D
452 467Right-handed alpha
Helix 98
98
D
468 470Right-handed 310
Helix 99
99
D
472 491Right-handed alpha
Helix 100
100
D
512 516Right-handed 310
Helix 101
101
D
527 539Right-handed alpha
Helix 102
102
D
540 542Right-handed 310
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There are 16 sheets in PDB entry 3T59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
97 103parallel
Strand 3
A
63 69parallel
Strand 4
A
123 127anti-parallel
Strand 5
A
137 138anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 222first strand
Strand 2
A
190 196parallel
Strand 3
A
239 244anti-parallel
Strand 4
A
249 251anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 303first strand
Strand 2
A
544 545parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 325first strand
Strand 2
A
369 370anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
97 103parallel
Strand 3
B
63 69parallel
Strand 4
B
123 127anti-parallel
Strand 5
B
137 139anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
216 222first strand
Strand 2
B
190 196parallel
Strand 3
B
239 244anti-parallel
Strand 4
B
250 251anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
302 303first strand
Strand 2
B
544 545parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 326first strand
Strand 2
B
368 370anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
C
97 103parallel
Strand 3
C
63 69parallel
Strand 4
C
123 127anti-parallel
Strand 5
C
137 138anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
216 221first strand
Strand 2
C
190 195parallel
Strand 3
C
239 244anti-parallel
Strand 4
C
249 251anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
302 303first strand
Strand 2
C
544 545parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 326first strand
Strand 2
C
368 370anti-parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 47first strand
Strand 2
D
97 103parallel
Strand 3
D
63 69parallel
Strand 4
D
123 127anti-parallel
Strand 5
D
137 138anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
218 220first strand
Strand 2
D
192 195parallel
Strand 3
D
239 240anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
302 303first strand
Strand 2
D
544 545parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
324 326first strand
Strand 2
D
368 370anti-parallel
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