Analysis of interatomic Contacts of Structural Units in PDB entry:
3T69


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T69 entry

There are 2 chains in PDB entry 3T69 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 8LEU 308
B
 TYR 8GLN 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3T69. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 47Right-handed alpha
Helix 2
2
A
47 59Right-handed alpha
Helix 3
3
A
73 75Right-handed 310
Helix 4
4
A
92 97Right-handed alpha
Helix 5
5
A
127 137Right-handed alpha
Helix 6
6
A
170 182Right-handed alpha
Helix 7
7
A
184 189Right-handed alpha
Helix 8
8
A
198 211Right-handed alpha
Helix 9
9
A
214 230Right-handed alpha
Helix 10
10
A
232 254Right-handed alpha
Helix 11
11
A
267 281Right-handed alpha
Helix 12
12
A
290 306Right-handed alpha
Helix 13
13
B
39 44Right-handed alpha
Helix 14
14
B
49 59Right-handed alpha
Helix 15
15
B
73 75Right-handed 310
Helix 16
16
B
92 98Right-handed 310
Helix 17
17
B
127 140Right-handed alpha
Helix 18
18
B
170 182Right-handed alpha
Helix 19
19
B
184 189Right-handed alpha
Helix 20
20
B
198 211Right-handed alpha
Helix 21
21
B
214 229Right-handed alpha
Helix 22
22
B
232 253Right-handed alpha
Helix 23
23
B
267 281Right-handed alpha
Helix 24
24
B
289 306Right-handed alpha
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There are 6 sheets in PDB entry 3T69. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 36first strand
Strand 2
A
19 24anti-parallel
Strand 3
A
9 14anti-parallel
Strand 4
A
67 71parallel
Strand 5
A
108 110parallel
Strand 6
A
99 100anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
113 116parallel
Strand 3
A
123 125anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 90first strand
Strand 2
A
162 169anti-parallel
Strand 3
A
153 159anti-parallel
Strand 4
A
144 148anti-parallel
Strand 5
A
261 266parallel
Strand 6
A
284 289parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 36first strand
Strand 2
B
19 24anti-parallel
Strand 3
B
9 14anti-parallel
Strand 4
B
67 71parallel
Strand 5
B
108 110parallel
Strand 6
B
99 101anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 86first strand
Strand 2
B
113 116parallel
Strand 3
B
123 125anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 90first strand
Strand 2
B
162 169anti-parallel
Strand 3
B
153 159anti-parallel
Strand 4
B
143 148anti-parallel
Strand 5
B
261 264parallel
Strand 6
B
284 285parallel
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