Analysis of interatomic Contacts of Structural Units in PDB entry:
3T6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T6C entry

There are 2 chains in PDB entry 3T6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3PRO 417
B
 LEU 4PRO 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 37 helices in PDB entry 3T6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 43Right-handed 310
Helix 2
2
A
44 54Right-handed alpha
Helix 3
3
A
55 61Right-handed alpha
Helix 4
4
A
67 78Right-handed alpha
Helix 5
5
A
84 107Right-handed alpha
Helix 6
6
A
109 114Right-handed alpha
Helix 7
7
A
132 146Right-handed alpha
Helix 8
8
A
195 215Right-handed alpha
Helix 9
9
A
229 240Right-handed alpha
Helix 10
10
A
241 244Right-handed 310
Helix 11
11
A
253 258Right-handed 310
Helix 12
12
A
259 267Right-handed alpha
Helix 13
13
A
279 289Right-handed alpha
Helix 14
14
A
298 303Right-handed 310
Helix 15
15
A
304 318Right-handed alpha
Helix 16
16
A
331 345Right-handed alpha
Helix 17
17
A
357 364Right-handed alpha
Helix 18
18
A
388 393Right-handed alpha
Helix 19
19
B
41 43Right-handed 310
Helix 20
20
B
44 54Right-handed alpha
Helix 21
21
B
55 61Right-handed alpha
Helix 22
22
B
67 78Right-handed alpha
Helix 23
23
B
84 107Right-handed alpha
Helix 24
24
B
109 114Right-handed alpha
Helix 25
25
B
132 146Right-handed alpha
Helix 26
26
B
166 176Right-handed alpha
Helix 27
27
B
195 215Right-handed alpha
Helix 28
28
B
229 240Right-handed alpha
Helix 29
29
B
241 244Right-handed 310
Helix 30
30
B
253 258Right-handed 310
Helix 31
31
B
259 267Right-handed alpha
Helix 32
32
B
279 289Right-handed alpha
Helix 33
33
B
298 303Right-handed 310
Helix 34
34
B
304 318Right-handed alpha
Helix 35
35
B
331 345Right-handed alpha
Helix 36
36
B
357 364Right-handed alpha
Helix 37
37
B
388 393Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 3T6C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 14first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
34 38anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 322first strand
Strand 2
A
294 295parallel
Strand 3
A
271 273parallel
Strand 4
A
247 249parallel
Strand 5
A
219 223parallel
Strand 6
A
150 153parallel
Strand 7
A
122 128parallel
Strand 8
A
351 352parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 322first strand
Strand 2
A
294 295parallel
Strand 3
A
271 273parallel
Strand 4
A
247 249parallel
Strand 5
A
219 223parallel
Strand 6
A
150 153parallel
Strand 7
A
122 128parallel
Strand 8
A
374 376anti-parallel
Strand 9
A
369 371anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
407 408parallel
Strand 3
A
414 415anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 14first strand
Strand 2
B
21 28anti-parallel
Strand 3
B
34 38anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 322first strand
Strand 2
B
294 295parallel
Strand 3
B
271 273parallel
Strand 4
B
247 249parallel
Strand 5
B
219 223parallel
Strand 6
B
150 155parallel
Strand 7
B
122 130parallel
Strand 8
B
351 352parallel
Back to list of sheets
Back to top of page

There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 322first strand
Strand 2
B
294 295parallel
Strand 3
B
271 273parallel
Strand 4
B
247 249parallel
Strand 5
B
219 223parallel
Strand 6
B
150 155parallel
Strand 7
B
122 130parallel
Strand 8
B
374 376anti-parallel
Strand 9
B
369 371anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
192 193first strand
Strand 2
B
407 408parallel
Strand 3
B
414 415anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il