Analysis of interatomic Contacts of Structural Units in PDB entry:
3T7E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T7E entry

There is 1 chain in PDB entry 3T7E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 293LEU 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 3T7E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
293 313Right-handed alpha
Helix 2
2
A
319 324Right-handed alpha
Helix 3
3
A
333 346Right-handed alpha
Helix 4
4
A
362 367Right-handed alpha
Helix 5
5
A
371 375Right-handed 310
Helix 6
6
A
378 391Right-handed alpha
Helix 7
7
A
412 430Right-handed alpha
Helix 8
8
A
439 442Right-handed 310
Helix 9
9
A
443 453Right-handed alpha
Helix 10
10
A
499 503Right-handed 310
Helix 11
11
A
512 530Right-handed alpha
Helix 12
12
A
573 584Right-handed alpha
Helix 13
13
A
584 594Right-handed alpha
Helix 14
14
A
594 603Right-handed alpha
Helix 15
15
A
603 613Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3T7E. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 399first strand
Strand 2
A
350 354parallel
Strand 3
A
326 330parallel
Strand 4
A
432 435parallel
Strand 5
A
456 462parallel
Strand 6
A
466 471anti-parallel
Strand 7
A
548 552anti-parallel
Strand 8
A
557 561anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
539 540first strand
Strand 2
A
543 544anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il