Analysis of interatomic Contacts of Structural Units in PDB entry:
3T7H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T7H entry

There are 2 chains in PDB entry 3T7H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1LEU 288
B
 GLY -1SER 289
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3T7H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 30Right-handed alpha
Helix 2
2
A
63 68Right-handed 310
Helix 3
3
A
89 96Right-handed alpha
Helix 4
4
A
97 114Right-handed alpha
Helix 5
5
A
116 120Right-handed 310
Helix 6
6
A
159 163Right-handed 310
Helix 7
7
A
164 175Right-handed alpha
Helix 8
8
A
193 201Right-handed alpha
Helix 9
9
A
218 230Right-handed alpha
Helix 10
10
B
18 30Right-handed alpha
Helix 11
11
B
63 68Right-handed 310
Helix 12
12
B
89 96Right-handed alpha
Helix 13
13
B
97 114Right-handed alpha
Helix 14
14
B
116 120Right-handed 310
Helix 15
15
B
159 163Right-handed 310
Helix 16
16
B
164 175Right-handed alpha
Helix 17
17
B
193 201Right-handed alpha
Helix 18
18
B
218 230Right-handed alpha
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There are 6 sheets in PDB entry 3T7H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 6first strand
Strand 2
A
151 157anti-parallel
Strand 3
A
248 256anti-parallel
Strand 4
A
235 241anti-parallel
Strand 5
A
202 206parallel
Strand 6
A
180 183anti-parallel
Strand 7
A
189 191anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 17first strand
Strand 2
A
58 62parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 273first strand
Strand 2
A
135 146anti-parallel
Strand 3
A
123 130anti-parallel
Strand 4
A
78 87parallel
Strand 5
A
37 46anti-parallel
Strand 6
B
37 46anti-parallel
Strand 7
B
78 87anti-parallel
Strand 8
B
123 130parallel
Strand 9
B
135 146anti-parallel
Strand 10
B
269 273anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
135 146anti-parallel
Strand 3
A
123 130anti-parallel
Strand 4
A
78 87parallel
Strand 5
A
37 46anti-parallel
Strand 6
B
37 46anti-parallel
Strand 7
B
78 87anti-parallel
Strand 8
B
123 130parallel
Strand 9
B
135 146anti-parallel
Strand 10
B
284 287anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 6first strand
Strand 2
B
151 157anti-parallel
Strand 3
B
248 256anti-parallel
Strand 4
B
235 241anti-parallel
Strand 5
B
202 206parallel
Strand 6
B
180 183anti-parallel
Strand 7
B
189 191anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 17first strand
Strand 2
B
58 62parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il