Analysis of interatomic Contacts of Structural Units in PDB entry:
3T7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T7R entry

There are 2 chains in PDB entry 3T7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 11PHE 258
B
 PHE 11PHE 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 3T7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 21Right-handed alpha
Helix 2
2
A
30 39Right-handed alpha
Helix 3
3
A
58 66Right-handed alpha
Helix 4
4
A
78 92Right-handed alpha
Helix 5
5
A
123 127Right-handed 310
Helix 6
6
A
128 137Right-handed alpha
Helix 7
7
A
159 170Right-handed alpha
Helix 8
8
A
176 187Right-handed alpha
Helix 9
9
A
197 201Right-handed 310
Helix 10
10
A
205 220Right-handed alpha
Helix 11
11
A
223 244Right-handed alpha
Helix 12
12
B
12 21Right-handed alpha
Helix 13
13
B
30 39Right-handed alpha
Helix 14
14
B
58 66Right-handed alpha
Helix 15
15
B
78 92Right-handed alpha
Helix 16
16
B
123 127Right-handed 310
Helix 17
17
B
128 137Right-handed alpha
Helix 18
18
B
159 170Right-handed alpha
Helix 19
19
B
176 187Right-handed alpha
Helix 20
20
B
197 201Right-handed 310
Helix 21
21
B
205 220Right-handed alpha
Helix 22
22
B
223 244Right-handed alpha
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There are 4 sheets in PDB entry 3T7R. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 102first strand
Strand 2
A
71 76parallel
Strand 3
A
49 53parallel
Strand 4
A
115 121parallel
Strand 5
A
140 153parallel
Strand 6
A
174 175parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 102first strand
Strand 2
A
71 76parallel
Strand 3
A
49 53parallel
Strand 4
A
115 121parallel
Strand 5
A
140 153parallel
Strand 6
A
247 256anti-parallel
Strand 7
A
188 195anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 102first strand
Strand 2
B
71 76parallel
Strand 3
B
49 53parallel
Strand 4
B
115 121parallel
Strand 5
B
140 153parallel
Strand 6
B
174 175parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 102first strand
Strand 2
B
71 76parallel
Strand 3
B
49 53parallel
Strand 4
B
115 121parallel
Strand 5
B
140 153parallel
Strand 6
B
247 256anti-parallel
Strand 7
B
188 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il