Analysis of interatomic Contacts of Structural Units in PDB entry:
3T95


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3T95 entry

There is 1 chain in PDB entry 3T95 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 26PHE 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 3T95. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 56Right-handed alpha
Helix 2
2
A
68 82Right-handed alpha
Helix 3
3
A
97 107Right-handed alpha
Helix 4
4
A
119 123Right-handed 310
Helix 5
5
A
131 148Right-handed alpha
Helix 6
6
A
163 181Right-handed alpha
Helix 7
7
A
195 210Right-handed alpha
Helix 8
8
A
222 234Right-handed alpha
Helix 9
9
A
246 256Right-handed alpha
Helix 10
10
A
266 285Right-handed alpha
Helix 11
11
A
305 310Right-handed 310
Helix 12
12
A
333 337Right-handed 310
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There are 3 sheets in PDB entry 3T95. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 61first strand
Strand 2
A
28 32parallel
Strand 3
A
86 89parallel
Strand 4
A
110 114parallel
Strand 5
A
125 128parallel
Strand 6
A
319 322parallel
Strand 7
A
299 304anti-parallel
Strand 8
A
292 295anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 191first strand
Strand 2
A
152 158parallel
Strand 3
A
215 218parallel
Strand 4
A
240 243parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
A
327 329anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il