Analysis of interatomic Contacts of Structural Units in PDB entry:
3TAH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TAH entry

There are 2 chains in PDB entry 3TAH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0GLU 259
B
 GLY -1THR 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 3TAH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
64 76Right-handed alpha
Helix 3
3
A
90 104Right-handed alpha
Helix 4
4
A
114 121Right-handed alpha
Helix 5
5
A
126 135Right-handed alpha
Helix 6
6
A
148 158Right-handed alpha
Helix 7
7
A
173 188Right-handed alpha
Helix 8
8
A
195 205Right-handed alpha
Helix 9
9
A
207 214Right-handed alpha
Helix 10
10
A
217 236Right-handed alpha
Helix 11
11
A
238 258Right-handed alpha
Helix 12
12
B
13 23Right-handed alpha
Helix 13
13
B
64 76Right-handed alpha
Helix 14
14
B
90 104Right-handed alpha
Helix 15
15
B
114 121Right-handed alpha
Helix 16
16
B
126 135Right-handed alpha
Helix 17
17
B
148 158Right-handed alpha
Helix 18
18
B
173 188Right-handed alpha
Helix 19
19
B
195 205Right-handed alpha
Helix 20
20
B
207 215Right-handed alpha
Helix 21
21
B
217 236Right-handed alpha
Helix 22
22
B
238 258Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3TAH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
37 43anti-parallel
Strand 3
A
46 53anti-parallel
Strand 4
A
2 8parallel
Strand 5
A
81 87parallel
Strand 6
A
108 113parallel
Strand 7
A
138 140parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 30first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
46 53anti-parallel
Strand 4
B
2 8parallel
Strand 5
B
81 87parallel
Strand 6
B
108 113parallel
Strand 7
B
138 140parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 125first strand
Strand 2
B
259 261anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il