Analysis of interatomic Contacts of Structural Units in PDB entry:
3TAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TAW entry

There is 1 chain in PDB entry 3TAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 38PHE 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 3TAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
139 144Right-handed alpha
Helix 2
2
A
195 200Right-handed alpha
Helix 3
3
A
298 302Right-handed 310
Helix 4
4
A
339 344Right-handed alpha
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There are 7 sheets in PDB entry 3TAW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 66first strand
Strand 2
A
71 74anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 88first strand
Strand 2
A
91 99anti-parallel
Strand 3
A
111 113anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 88first strand
Strand 2
A
91 99anti-parallel
Strand 3
A
116 118anti-parallel
Strand 4
A
125 126anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 155first strand
Strand 2
A
161 168anti-parallel
Strand 3
A
173 180anti-parallel
Strand 4
A
187 191anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 222first strand
Strand 2
A
209 216anti-parallel
Strand 3
A
281 284parallel
Strand 4
A
287 295anti-parallel
Strand 5
A
274 277anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 251first strand
Strand 2
A
239 243anti-parallel
Strand 3
A
229 233anti-parallel
Strand 4
A
209 216anti-parallel
Strand 5
A
281 284parallel
Strand 6
A
287 295anti-parallel
Strand 7
A
311 318anti-parallel
Strand 8
A
326 329anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 360first strand
Strand 2
A
363 370anti-parallel
Strand 3
A
374 380anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il