Analysis of interatomic Contacts of Structural Units in PDB entry:
3TAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TAZ entry

There are 2 chains in PDB entry 3TAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 3ILE 441
B
 LEU 3ILE 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 3TAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 24Right-handed alpha
Helix 2
2
A
32 36Right-handed 310
Helix 3
3
A
89 115Right-handed alpha
Helix 4
4
A
128 135Right-handed alpha
Helix 5
5
A
140 153Right-handed alpha
Helix 6
6
A
154 184Right-handed alpha
Helix 7
7
A
191 204Right-handed alpha
Helix 8
8
A
234 240Right-handed alpha
Helix 9
9
A
244 254Right-handed alpha
Helix 10
10
A
262 287Right-handed alpha
Helix 11
11
A
302 307Right-handed alpha
Helix 12
12
A
314 324Right-handed alpha
Helix 13
13
A
343 347Right-handed 310
Helix 14
14
A
348 353Right-handed alpha
Helix 15
15
A
355 365Right-handed alpha
Helix 16
16
A
387 397Right-handed alpha
Helix 17
17
A
404 415Right-handed alpha
Helix 18
18
A
424 433Right-handed alpha
Helix 19
19
A
436 440Right-handed 310
Helix 20
20
B
5 21Right-handed alpha
Helix 21
21
B
22 27Right-handed alpha
Helix 22
22
B
28 35Right-handed 310
Helix 23
23
B
89 115Right-handed alpha
Helix 24
24
B
128 135Right-handed alpha
Helix 25
25
B
138 154Right-handed alpha
Helix 26
26
B
154 183Right-handed alpha
Helix 27
27
B
191 208Right-handed alpha
Helix 28
28
B
223 225Right-handed 310
Helix 29
29
B
234 240Right-handed alpha
Helix 30
30
B
244 255Right-handed alpha
Helix 31
31
B
262 288Right-handed alpha
Helix 32
32
B
314 326Right-handed alpha
Helix 33
33
B
348 353Right-handed alpha
Helix 34
34
B
355 365Right-handed alpha
Helix 35
35
B
387 397Right-handed alpha
Helix 36
36
B
404 415Right-handed alpha
Helix 37
37
B
419 433Right-handed alpha
Helix 38
38
B
434 440Right-handed alpha
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There are 5 sheets in PDB entry 3TAZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
78 87parallel
Strand 3
A
62 73anti-parallel
Strand 4
A
46 59anti-parallel
Strand 5
A
121 125parallel
Strand 6
A
292 296parallel
Strand 7
A
380 384anti-parallel
Strand 8
A
367 372anti-parallel
Strand 9
A
332 335anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 211first strand
Strand 2
A
215 219anti-parallel
Strand 3
A
258 259anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 233first strand
Strand 2
B
231 232anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
78 87parallel
Strand 3
B
62 73anti-parallel
Strand 4
B
46 59anti-parallel
Strand 5
B
121 125parallel
Strand 6
B
292 296parallel
Strand 7
B
379 384anti-parallel
Strand 8
B
367 372anti-parallel
Strand 9
B
332 335anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 221first strand
Strand 2
B
256 260anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il