Analysis of interatomic Contacts of Structural Units in PDB entry:
3TBF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TBF entry

There are 4 chains in PDB entry 3TBF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 246PRO 602
B
 ALA 245PRO 602
C
 ALA 245PRO 602
D
 ALA 245ASP 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are151 helices in PDB entry 3TBF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
252 260Right-handed alpha
Helix 2
2
A
260 271Right-handed alpha
Helix 3
3
A
280 283Right-handed 310
Helix 4
4
A
286 293Right-handed alpha
Helix 5
5
A
302 319Right-handed alpha
Helix 6
6
A
329 333Right-handed alpha
Helix 7
7
A
354 365Right-handed alpha
Helix 8
8
A
381 387Right-handed alpha
Helix 9
9
A
404 425Right-handed alpha
Helix 10
10
A
429 442Right-handed alpha
Helix 11
11
A
442 452Right-handed alpha
Helix 12
12
A
453 462Right-handed alpha
Helix 13
13
A
463 465Right-handed 310
Helix 14
14
A
477 494Right-handed alpha
Helix 15
15
A
503 505Right-handed 310
Helix 16
16
A
528 542Right-handed alpha
Helix 17
17
A
553 558Right-handed 310
Helix 18
18
A
574 596Right-handed alpha
Helix 19
19
B
252 260Right-handed alpha
Helix 20
20
B
260 271Right-handed alpha
Helix 21
21
B
288 294Right-handed alpha
Helix 22
22
B
302 319Right-handed alpha
Helix 23
23
B
329 333Right-handed alpha
Helix 24
24
B
354 366Right-handed alpha
Helix 25
25
B
381 387Right-handed alpha
Helix 26
26
B
404 425Right-handed alpha
Helix 27
27
B
429 442Right-handed alpha
Helix 28
28
B
442 452Right-handed alpha
Helix 29
29
B
453 461Right-handed alpha
Helix 30
30
B
462 467Right-handed 310
Helix 31
31
B
477 494Right-handed alpha
Helix 32
32
B
503 505Right-handed 310
Helix 33
33
B
508 513Right-handed 310
Helix 34
34
B
528 542Right-handed alpha
Helix 35
35
B
553 558Right-handed 310
Helix 36
36
B
575 595Right-handed alpha
Helix 37
37
C
252 260Right-handed alpha
Helix 38
38
C
260 271Right-handed alpha
Helix 39
39
C
280 283Right-handed 310
Helix 40
40
C
284 285Right-handed 310
Helix 41
41
C
286 294Right-handed alpha
Helix 42
42
C
302 319Right-handed alpha
Helix 43
43
C
329 333Right-handed alpha
Helix 44
44
C
354 365Right-handed alpha
Helix 45
45
C
381 387Right-handed alpha
Helix 46
46
C
404 425Right-handed alpha
Helix 47
47
C
429 442Right-handed alpha
Helix 48
48
C
442 452Right-handed alpha
Helix 49
49
C
453 462Right-handed alpha
Helix 50
50
C
463 465Right-handed 310
Helix 51
51
C
477 494Right-handed alpha
Helix 52
52
C
503 505Right-handed 310
Helix 53
53
C
508 513Right-handed 310
Helix 54
54
C
528 542Right-handed alpha
Helix 55
55
C
553 558Right-handed 310
Helix 56
56
C
574 595Right-handed alpha
Helix 57
57
D
252 260Right-handed alpha
Helix 58
58
D
260 271Right-handed alpha
Helix 59
59
D
280 283Right-handed 310
Helix 60
60
D
284 285Right-handed 310
Helix 61
61
D
286 293Right-handed alpha
Helix 62
62
D
302 320Right-handed alpha
Helix 63
63
D
329 333Right-handed alpha
Helix 64
64
D
354 365Right-handed alpha
Helix 65
65
D
381 387Right-handed alpha
Helix 66
66
D
404 425Right-handed alpha
Helix 67
67
D
429 442Right-handed alpha
Helix 68
68
D
442 452Right-handed alpha
Helix 69
69
D
453 462Right-handed alpha
Helix 70
70
D
463 465Right-handed 310
Helix 71
71
D
477 494Right-handed alpha
Helix 72
72
D
503 505Right-handed 310
Helix 73
73
D
508 513Right-handed 310
Helix 74
74
D
528 542Right-handed alpha
Helix 75
75
D
553 558Right-handed 310
Helix 76
76
D
574 595Right-handed alpha
Helix 77
77
E
252 260Right-handed alpha
Helix 78
78
E
260 271Right-handed alpha
Helix 79
79
E
279 283Right-handed 310
Helix 80
80
E
284 285Right-handed 310
Helix 81
81
E
286 294Right-handed alpha
Helix 82
82
E
302 319Right-handed alpha
Helix 83
83
E
329 333Right-handed alpha
Helix 84
84
E
354 365Right-handed alpha
Helix 85
85
E
381 387Right-handed alpha
Helix 86
86
E
404 425Right-handed alpha
Helix 87
87
E
429 442Right-handed alpha
Helix 88
88
E
442 452Right-handed alpha
Helix 89
89
E
453 462Right-handed alpha
Helix 90
90
E
463 465Right-handed 310
Helix 91
91
E
475 477Right-handed 310
Helix 92
92
E
478 494Right-handed alpha
Helix 93
93
E
503 505Right-handed 310
Helix 94
94
E
509 513Right-handed 310
Helix 95
95
E
528 542Right-handed alpha
Helix 96
96
E
553 558Right-handed 310
Helix 97
97
E
574 596Right-handed alpha
Helix 98
98
F
252 260Right-handed alpha
Helix 99
99
F
260 271Right-handed alpha
Helix 100
100
F
280 283Right-handed 310
Helix 101
101
F
284 285Right-handed 310
Helix 102
102
F
286 294Right-handed alpha
Helix 103
103
F
303 319Right-handed alpha
Helix 104
104
F
329 333Right-handed alpha
Helix 105
105
F
354 366Right-handed alpha
Helix 106
106
F
381 387Right-handed alpha
Helix 107
107
F
404 425Right-handed alpha
Helix 108
108
F
429 452Right-handed alpha
Helix 109
109
F
453 462Right-handed alpha
Helix 110
110
F
463 467Right-handed 310
Helix 111
111
F
477 494Right-handed alpha
Helix 112
112
F
503 513Right-handed 310
Helix 113
113
F
528 542Right-handed alpha
Helix 114
114
F
553 558Right-handed 310
Helix 115
115
F
574 596Right-handed alpha
Helix 116
116
G
252 260Right-handed alpha
Helix 117
117
G
260 271Right-handed alpha
Helix 118
118
G
279 283Right-handed 310
Helix 119
119
G
286 293Right-handed alpha
Helix 120
120
G
302 319Right-handed alpha
Helix 121
121
G
329 333Right-handed alpha
Helix 122
122
G
354 365Right-handed alpha
Helix 123
123
G
381 386Right-handed alpha
Helix 124
124
G
404 425Right-handed alpha
Helix 125
125
G
429 442Right-handed alpha
Helix 126
126
G
442 452Right-handed alpha
Helix 127
127
G
453 461Right-handed alpha
Helix 128
128
G
462 465Right-handed 310
Helix 129
129
G
477 494Right-handed alpha
Helix 130
130
G
503 505Right-handed 310
Helix 131
131
G
508 513Right-handed 310
Helix 132
132
G
528 542Right-handed alpha
Helix 133
133
G
553 558Right-handed 310
Helix 134
134
G
574 596Right-handed alpha
Helix 135
135
H
252 260Right-handed alpha
Helix 136
136
H
260 271Right-handed alpha
Helix 137
137
H
285 294Right-handed alpha
Helix 138
138
H
302 319Right-handed alpha
Helix 139
139
H
329 333Right-handed alpha
Helix 140
140
H
354 366Right-handed alpha
Helix 141
141
H
381 387Right-handed alpha
Helix 142
142
H
404 425Right-handed alpha
Helix 143
143
H
429 442Right-handed alpha
Helix 144
144
H
442 452Right-handed alpha
Helix 145
145
H
453 461Right-handed alpha
Helix 146
146
H
462 465Right-handed 310
Helix 147
147
H
477 493Right-handed alpha
Helix 148
148
H
508 512Right-handed 310
Helix 149
149
H
528 541Right-handed alpha
Helix 150
150
H
553 558Right-handed 310
Helix 151
151
H
574 595Right-handed alpha
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There are 20 sheets in PDB entry 3TBF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
277 278anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
324 328first strand
Strand 2
A
296 301parallel
Strand 3
A
343 349parallel
Strand 4
A
369 376parallel
Strand 5
A
389 392parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 501first strand
Strand 2
A
469 474parallel
Strand 3
A
518 523parallel
Strand 4
A
545 551parallel
Strand 5
A
564 568parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
324 328first strand
Strand 2
B
296 301parallel
Strand 3
B
343 349parallel
Strand 4
B
371 376parallel
Strand 5
B
389 392parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
496 501first strand
Strand 2
B
469 474parallel
Strand 3
B
518 523parallel
Strand 4
B
545 551parallel
Strand 5
B
564 568parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 274first strand
Strand 2
C
277 278anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
324 328first strand
Strand 2
C
296 301parallel
Strand 3
C
343 349parallel
Strand 4
C
369 376parallel
Strand 5
C
389 392parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
496 501first strand
Strand 2
C
469 474parallel
Strand 3
C
518 523parallel
Strand 4
C
545 551parallel
Strand 5
C
564 568parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
273 274first strand
Strand 2
D
277 278anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
324 328first strand
Strand 2
D
296 301parallel
Strand 3
D
343 349parallel
Strand 4
D
369 376parallel
Strand 5
D
389 392parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
496 501first strand
Strand 2
D
469 474parallel
Strand 3
D
518 523parallel
Strand 4
D
545 551parallel
Strand 5
D
564 568parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
324 328first strand
Strand 2
E
296 301parallel
Strand 3
E
343 349parallel
Strand 4
E
369 376parallel
Strand 5
E
389 392parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
496 501first strand
Strand 2
E
469 474parallel
Strand 3
E
518 523parallel
Strand 4
E
545 551parallel
Strand 5
E
564 568parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
273 274first strand
Strand 2
F
277 278anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
324 328first strand
Strand 2
F
296 301parallel
Strand 3
F
343 349parallel
Strand 4
F
369 376parallel
Strand 5
F
389 392parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
496 501first strand
Strand 2
F
469 474parallel
Strand 3
F
518 523parallel
Strand 4
F
545 551parallel
Strand 5
F
564 568parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
324 328first strand
Strand 2
G
296 301parallel
Strand 3
G
343 349parallel
Strand 4
G
369 376parallel
Strand 5
G
389 392parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
496 501first strand
Strand 2
G
469 474parallel
Strand 3
G
518 523parallel
Strand 4
G
545 551parallel
Strand 5
G
564 568parallel
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There are 5 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
324 328first strand
Strand 2
H
296 301parallel
Strand 3
H
343 349parallel
Strand 4
H
369 376parallel
Strand 5
H
389 392parallel
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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
496 501first strand
Strand 2
H
469 474parallel
Strand 3
H
518 523parallel
Strand 4
H
545 551parallel
Strand 5
H
564 568parallel
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