Analysis of interatomic Contacts of Structural Units in PDB entry:
3TE6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TE6 entry

There are 2 chains in PDB entry 3TE6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 529ASN 844
B
 PRO 529ASN 844
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3TE6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
534 569Right-handed alpha
Helix 2
2
A
582 599Right-handed alpha
Helix 3
3
A
622 633Right-handed alpha
Helix 4
4
A
642 653Right-handed alpha
Helix 5
5
A
654 658Right-handed 310
Helix 6
6
A
674 686Right-handed alpha
Helix 7
7
A
703 709Right-handed alpha
Helix 8
8
A
710 715Right-handed alpha
Helix 9
9
A
726 742Right-handed alpha
Helix 10
10
A
781 797Right-handed alpha
Helix 11
11
A
798 821Right-handed alpha
Helix 12
12
A
836 844Right-handed alpha
Helix 13
13
B
534 569Right-handed alpha
Helix 14
14
B
582 602Right-handed alpha
Helix 15
15
B
622 631Right-handed alpha
Helix 16
16
B
639 652Right-handed alpha
Helix 17
17
B
654 658Right-handed 310
Helix 18
18
B
673 686Right-handed alpha
Helix 19
19
B
702 710Right-handed alpha
Helix 20
20
B
710 716Right-handed alpha
Helix 21
21
B
726 742Right-handed alpha
Helix 22
22
B
781 797Right-handed alpha
Helix 23
23
B
798 821Right-handed alpha
Helix 24
24
B
835 844Right-handed alpha
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There are 8 sheets in PDB entry 3TE6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
608 614first strand
Strand 2
A
660 666parallel
Strand 3
A
691 696parallel
Strand 4
A
574 578parallel
Strand 5
A
717 721parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
755 757first strand
Strand 2
A
745 749anti-parallel
Strand 3
A
773 776anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
778 779first strand
Strand 2
A
832 833parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
823 824first strand
Strand 2
A
827 828anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
609 614first strand
Strand 2
B
661 666parallel
Strand 3
B
691 696parallel
Strand 4
B
574 578parallel
Strand 5
B
717 721parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
755 758first strand
Strand 2
B
746 749anti-parallel
Strand 3
B
773 775anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
777 779first strand
Strand 2
B
831 833parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
823 824first strand
Strand 2
B
827 828anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il