Analysis of interatomic Contacts of Structural Units in PDB entry:
3TEV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3TEV entry

There are 2 chains in PDB entry 3TEV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 8ALA 332
B
 GLU 6ALA 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3TEV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 17Right-handed 310
Helix 2
2
A
29 40Right-handed alpha
Helix 3
3
A
47 51Right-handed 310
Helix 4
4
A
53 69Right-handed alpha
Helix 5
5
A
94 102Right-handed alpha
Helix 6
6
A
103 122Right-handed alpha
Helix 7
7
A
142 146Right-handed 310
Helix 8
8
A
150 167Right-handed alpha
Helix 9
9
A
197 204Right-handed alpha
Helix 10
10
A
206 213Right-handed alpha
Helix 11
11
A
214 216Right-handed 310
Helix 12
12
A
234 237Right-handed 310
Helix 13
13
A
238 243Right-handed alpha
Helix 14
14
A
263 270Right-handed alpha
Helix 15
15
A
271 283Right-handed alpha
Helix 16
16
A
292 307Right-handed alpha
Helix 17
17
A
310 328Right-handed alpha
Helix 18
18
B
14 17Right-handed 310
Helix 19
19
B
29 40Right-handed alpha
Helix 20
20
B
47 51Right-handed 310
Helix 21
21
B
53 69Right-handed alpha
Helix 22
22
B
94 102Right-handed alpha
Helix 23
23
B
103 122Right-handed alpha
Helix 24
24
B
142 146Right-handed 310
Helix 25
25
B
150 167Right-handed alpha
Helix 26
26
B
197 204Right-handed alpha
Helix 27
27
B
206 213Right-handed alpha
Helix 28
28
B
214 216Right-handed 310
Helix 29
29
B
234 237Right-handed 310
Helix 30
30
B
238 243Right-handed alpha
Helix 31
31
B
263 268Right-handed alpha
Helix 32
32
B
271 283Right-handed alpha
Helix 33
33
B
292 307Right-handed alpha
Helix 34
34
B
310 328Right-handed alpha
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There are 6 sheets in PDB entry 3TEV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
125 126parallel
Strand 3
A
73 76parallel
Strand 4
A
43 46parallel
Strand 5
A
19 21parallel
Strand 6
A
287 288parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 177first strand
Strand 2
A
218 221parallel
Strand 3
A
255 258parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 194first strand
Strand 2
A
225 226parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 172first strand
Strand 2
B
125 126parallel
Strand 3
B
73 76parallel
Strand 4
B
43 46parallel
Strand 5
B
19 21parallel
Strand 6
B
287 289parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
174 177first strand
Strand 2
B
218 221parallel
Strand 3
B
255 258parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
193 194first strand
Strand 2
B
225 226parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il